Tool for estimating growth rates from microbial growth curves
☆32Feb 4, 2026Updated 7 months ago
Alternatives and similar repositories for croissance
Users that are interested in croissance are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Model predictive control (MPC) for fermentations☆12Feb 28, 2019Updated 7 years ago
- Python toolbox for phenotype analysis of arrayed microbial colonies☆17Feb 9, 2024Updated 2 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Aug 3, 2026Updated last month
- Framework for Object Oriented Modelling of Bioprocesses☆18Feb 18, 2021Updated 5 years ago
- 🧮 🔢 Generate multi-sample k-mer count matrix from WGS☆11Jan 17, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Robust and user-friendly analysis of growth curves☆29Feb 26, 2026Updated 6 months ago
- ReFramed: metabolic modeling package☆64Jun 26, 2026Updated 2 months ago
- SRA python tools☆11Jun 9, 2021Updated 5 years ago
- cameo - computer aided metabolic engineering & optimization☆128Nov 7, 2022Updated 3 years ago
- Testing hybridization using species trees☆10Aug 25, 2017Updated 9 years ago
- OmniSegger - from the Wiggins Lab at UW☆11Jun 18, 2026Updated 2 months ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆12Jul 22, 2026Updated last month
- QGIS svg icons - Animal silhouettes☆14Nov 17, 2018Updated 7 years ago
- ☆12Aug 12, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Uses cDBG to count unitigs in bacterial populations☆19Feb 15, 2023Updated 3 years ago
- tree visualization for tree + annotation data☆61Jun 17, 2025Updated last year
- ChiBio primary operating system.☆27Feb 10, 2026Updated 6 months ago
- Python package for creating, calibrating and simulating RBA models☆14Aug 19, 2026Updated 2 weeks ago
- Automation of the creation of a progress bar in powerpoint, and an overview of the sections on each slide☆13Nov 14, 2017Updated 8 years ago
- a versatile toolkit for processing and analyzing diverse types of sequence data☆24May 19, 2026Updated 3 months ago
- R package for fitting kinetic models with one or more state variables to chemical degradation data☆13Jun 22, 2026Updated 2 months ago
- A Microbiology-based Rogue-Like Game written in Lua via Love2D☆12Updated this week
- Interpretable genotype-phenotype landscape modeling☆36Dec 3, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆31May 11, 2026Updated 3 months ago
- Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.☆148Updated this week
- BiG-MEx implementation as Docker images and R packages☆13Feb 9, 2022Updated 4 years ago
- A very simple BLAST filtering pipeline☆20Mar 28, 2014Updated 12 years ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆45Sep 16, 2025Updated 11 months ago
- Release of the whole cell E. coli model.☆78Dec 10, 2024Updated last year
- COBRApy is a package for constraint-based modeling of metabolic networks.☆585Aug 29, 2026Updated last week
- ☆16Apr 11, 2026Updated 4 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A tool to root phylogenies☆23Sep 5, 2024Updated 2 years ago
- Metabolic scanning and annotation of Metagenomes☆10Dec 18, 2025Updated 8 months ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆29Apr 11, 2018Updated 8 years ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆23Mar 29, 2021Updated 5 years ago
- ☆13May 15, 2026Updated 3 months ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Dec 4, 2018Updated 7 years ago
- Teaching materials for cobrapy, cameo, escher and DD-DeCaF☆28Jul 12, 2022Updated 4 years ago