biosustain / croissanceView external linksLinks
Tool for estimating growth rates from microbial growth curves
☆31Feb 4, 2026Updated last week
Alternatives and similar repositories for croissance
Users that are interested in croissance are comparing it to the libraries listed below
Sorting:
- Python toolbox for phenotype analysis of arrayed microbial colonies☆17Feb 9, 2024Updated 2 years ago
- ☆22Apr 3, 2023Updated 2 years ago
- SRA python tools☆11Jun 9, 2021Updated 4 years ago
- 🧮 🔢 Generate multi-sample k-mer count matrix from WGS☆11Jan 17, 2026Updated 3 weeks ago
- A tutorial on cobrapy☆10Nov 23, 2022Updated 3 years ago
- Introduction to Python Programming☆11Mar 31, 2020Updated 5 years ago
- Predicting microbial growth in a mixed culture from growth curve data☆14Jan 20, 2026Updated 3 weeks ago
- A Python API for managing genotype-phenotype map data☆12Aug 18, 2023Updated 2 years ago
- Induce word representations using random indexing (RI)☆29Jun 17, 2010Updated 15 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆38Aug 18, 2023Updated 2 years ago
- tree visualization for tree + annotation data☆50Jun 17, 2025Updated 7 months ago
- Analysis of Microbial Growth Assays☆16Mar 12, 2025Updated 11 months ago
- cameo - computer aided metabolic engineering & optimization☆124Nov 7, 2022Updated 3 years ago
- Robust and user-friendly analysis of growth curves☆29Sep 19, 2025Updated 4 months ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Dec 11, 2025Updated 2 months ago
- A Simulator for Bacterial Machine learning and Genome-Wide Association Studies☆22Jul 21, 2021Updated 4 years ago
- Toolbox for non-linear calibration modeling.☆29Jan 30, 2026Updated 2 weeks ago
- ChiBio primary operating system.☆28Updated this week
- ReFramed: metabolic modeling package☆63Sep 16, 2025Updated 4 months ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆27Apr 11, 2018Updated 7 years ago
- Locus and lineage tests for bacterial GWAS☆28Oct 5, 2017Updated 8 years ago
- Data sets and ML models versioning example from DVC get started☆10Jun 4, 2024Updated last year
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Dec 4, 2018Updated 7 years ago
- Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performan…☆81Jan 13, 2026Updated last month
- QGIS svg icons - Animal silhouettes☆11Nov 17, 2018Updated 7 years ago
- ☆18Oct 23, 2025Updated 3 months ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Jul 15, 2025Updated 6 months ago
- PLSDB pipeline to collect bacterial plasmids from NCBI☆39Oct 23, 2024Updated last year
- ☆13Aug 12, 2022Updated 3 years ago
- End to End dCommerce experience built using the Boson Protocol Core Components SDK☆12Updated this week
- Scripts used to generate the data/figures contained in "Single Cell Transcriptomics Reveals Cell Type Specific Diversification in Human H…☆13Mar 10, 2023Updated 2 years ago
- Claude Code configs for the expert Solana builder. CLAUDE.md, agents, commands, hooks, rules, skills and settings across Web, Anchor, Pin…☆26Jan 17, 2026Updated 3 weeks ago
- Simulate short-reads datasets using probabilistic models☆11Jun 1, 2013Updated 12 years ago
- Sample code for Raspberry Pi and Pimoroni Enviro pHat, Automation pHat and Automation Hat☆10Jun 24, 2021Updated 4 years ago
- An open-source python library for the processing of fluorescence video data☆16Jul 5, 2025Updated 7 months ago
- The official NodeJS driver for the Cyton board over Serial.☆16Feb 18, 2019Updated 6 years ago
- pGWAS and functional filtering pipeline to identify candidate adaptive genetic traits in bacteria☆11Feb 6, 2018Updated 8 years ago
- ☆15Nov 26, 2024Updated last year
- ☆13Updated this week