BioSystemsUM / MEWpyLinks
Metabolic Engineering Workbench
☆41Updated last year
Alternatives and similar repositories for MEWpy
Users that are interested in MEWpy are comparing it to the libraries listed below
Sorting:
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆46Updated last month
- An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced feat…☆58Updated last month
- cameo - computer aided metabolic engineering & optimization☆122Updated 3 years ago
- Enzyme-constrained genome-scale models in python☆29Updated 2 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 6 years ago
- D3.js based visualizations of cobrapy metabolic models☆49Updated 5 years ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆63Updated 6 months ago
- Toolbox for including enzyme constraints on a genome-scale model.☆79Updated 2 weeks ago
- Analysis of ensembles of metabolic network reconstructions☆21Updated 2 months ago
- The BiGG Models website server☆85Updated 6 years ago
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆27Updated 2 years ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- CobraMod is a Python 3 open-source package which enables modifying and extending genome-scale metabolic models with metabolic pathway inf…☆15Updated last week
- BGC Detection and Classification Using Deep Learning☆157Updated 2 years ago
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆62Updated 5 years ago
- A Python framework for structural systems biology☆110Updated 5 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated last week
- Codon usage tables in code-friendly format + Python bindings☆40Updated 6 months ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 4 years ago
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆30Updated 3 years ago
- An RNA manipulation library.☆56Updated last year
- Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…☆28Updated 3 years ago
- ReFramed: metabolic modeling package☆62Updated 2 months ago
- Enzyme models that take into account kinetics, allostery and thermodynamics☆27Updated last year
- A high-fidelity E. coli RNA-seq compendium☆33Updated 4 years ago
- General low-level API☆50Updated 3 years ago
- ☆29Updated last year
- A route planner for DNA assembly☆36Updated 6 months ago
- Release of the whole cell E. coli model.☆72Updated 11 months ago
- nucleic acid folding☆108Updated 3 months ago