BioSystemsUM / MEWpyLinks
Metabolic Engineering Workbench
☆41Updated last year
Alternatives and similar repositories for MEWpy
Users that are interested in MEWpy are comparing it to the libraries listed below
Sorting:
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆48Updated last month
- An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced feat…☆62Updated last month
- Enzyme-constrained genome-scale models in python☆34Updated 2 years ago
- D3.js based visualizations of cobrapy metabolic models☆50Updated 5 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 7 years ago
- cameo - computer aided metabolic engineering & optimization☆124Updated 3 years ago
- METIS: A versatile active learning workflow for optimization of genetic and metabolic networks☆34Updated 3 years ago
- Toolbox for including enzyme constraints on a genome-scale model.☆79Updated last week
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆64Updated 8 months ago
- The BiGG Models website server☆88Updated 6 years ago
- Codon usage tables in code-friendly format + Python bindings☆42Updated 8 months ago
- Analysis of ensembles of metabolic network reconstructions☆21Updated 3 weeks ago
- CobraMod is a Python 3 open-source package which enables modifying and extending genome-scale metabolic models with metabolic pathway inf…☆16Updated 2 weeks ago
- ☆26Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated last month
- Comprehensive Python client for the Uniprot REST API☆55Updated 4 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆80Updated this week
- Python Implementation of Codon Adaption Index☆37Updated 3 years ago
- A Python framework for structural systems biology☆109Updated 5 years ago
- ReFramed: metabolic modeling package☆63Updated 4 months ago
- The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and desig…☆61Updated 10 years ago
- nucleic acid folding☆110Updated 5 months ago
- General low-level API☆50Updated 3 years ago
- Generate biomass objective function stoichiometric coefficients for genome-scale models from experimental data☆27Updated 2 years ago
- Enzyme models that take into account kinetics, allostery and thermodynamics☆27Updated last year
- A Python package for mapping sequence aligned data onto protein structures☆37Updated 4 years ago
- The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.☆121Updated 3 weeks ago
- Release of the whole cell E. coli model.☆74Updated last year
- Teaching materials for cobrapy, cameo, escher and DD-DeCaF☆25Updated 3 years ago
- ☆30Updated 2 years ago