Alternatives and similar repositories for precise-db

Users that are interested in precise-db are comparing it to the libraries listed below

• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆40Updated 2 weeks ago
• jrjhealey / bioinfo-tools
  Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.
  ☆59Updated 4 years ago
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆33Updated last year
• ponnhide / sangerseq_viewer
  sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.
  ☆36Updated last year
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆42Updated 3 months ago
• hawkjo / freebarcodes
  FREE Divergence Error-Correcting DNA Barcodes
  ☆27Updated 5 months ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆50Updated last month
• Benjamin-Lee / CodonAdaptationIndex
  Python Implementation of Codon Adaption Index
  ☆37Updated 2 years ago
• labomics / MetaLogo
  MetaLogo: a heterogeneity-aware sequence logo generator and aligner
  ☆21Updated 2 years ago
• bigbio / ibaqpy
  Absolute quantification package based on quantms.io
  ☆14Updated 2 months ago
• klamt-lab / straindesign
  StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy
  ☆42Updated 4 months ago
• bcgsc / ntEmbd
  Deep learning embedding for nucleotide sequences
  ☆19Updated 3 months ago
• cdanielmachado / reframed
  ReFramed: metabolic modeling package
  ☆59Updated 2 months ago
• sanderlab / alignmentviewer
  Multiple sequence alignment visualizer
  ☆29Updated 2 years ago
• althonos / rich-msa
  A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
  ☆85Updated 3 years ago
• EddyRivasLab / infernal
  RNA secondary structure/sequence profiles for homology search and alignment
  ☆112Updated 8 months ago
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆27Updated 6 months ago
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆28Updated last month
• ginkgobioworks / geckopy
  Enzyme-constrained genome-scale models in python
  ☆28Updated last year
• ialbert / bio
  Making bioinformatics fun again
  ☆73Updated last month
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆74Updated last month
• Edinburgh-Genome-Foundry / DnaCauldron
  Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
  ☆61Updated 2 months ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year
• Edinburgh-Genome-Foundry / python_codon_tables
  Codon usage tables in code-friendly format + Python bindings
  ☆37Updated 2 months ago
• mariodosreis / tai
  The tRNA adaptation index
  ☆18Updated 2 months ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆94Updated 11 months ago
• EnzoAndree / HmmPy
  A Pure-Python parser of HMMER3 output
  ☆17Updated 9 months ago
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆36Updated last week
• ebi-jdispatcher / webservice-clients
  A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs
  ☆54Updated 11 months ago
• CapraLab / cosmis
  COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …
  ☆17Updated 2 years ago