SBRG / precise-dbLinks
A high-fidelity E. coli RNA-seq compendium
☆32Updated 4 years ago
Alternatives and similar repositories for precise-db
Users that are interested in precise-db are comparing it to the libraries listed below
Sorting:
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated last month
- Comprehensive Python client for the Uniprot REST API☆51Updated 2 months ago
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆60Updated 4 years ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆62Updated 3 months ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆43Updated 5 months ago
- Find common blocks and differences between DNA sequences☆42Updated 4 months ago
- Nanopore Plasmid Sequencing☆33Updated last year
- ReFramed: metabolic modeling package☆59Updated 4 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Deep learning embedding for nucleotide sequences☆19Updated 5 months ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 2 years ago
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆17Updated 2 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆27Updated 6 months ago
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Codon usage tables in code-friendly format + Python bindings☆37Updated 3 months ago
- A collection of M models downloaded from published studies☆16Updated 9 years ago
- The tRNA adaptation index☆18Updated 4 months ago
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆36Updated last year
- nucleic acid folding☆101Updated 2 weeks ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 8 years ago
- Tool for deep mutational scanning experiments.☆54Updated 5 months ago
- Multiple sequence alignment visualizer☆29Updated 2 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆48Updated last month
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated last week
- RNA secondary structure/sequence profiles for homology search and alignment☆113Updated 9 months ago
- A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs☆54Updated last year
- An RNA manipulation library.☆57Updated last year