Alternatives and similar repositories for anyvar

Users that are interested in anyvar are comparing it to the libraries listed below

• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆41Updated last month
• varfish-org / hgvs-rs
  A port of biocommons/hgvs to the Rust programming language
  ☆13Updated last month
• biocommons / bioutils
  provides common tools and lookup tables used primarily by the hgvs and uta packages
  ☆22Updated 2 months ago
• SACGF / cdot
  Transcript versions for HGVS libraries
  ☆31Updated this week
• cancervariants / metakb
  Central repository for the VICC metakb web application
  ☆15Updated this week
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• biocommons / uta
  Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…
  ☆64Updated last month
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• cancervariants / variation-normalization
  Services and guidelines for normalizing variants
  ☆14Updated 3 weeks ago
• brentp / geneimpacts
  prioritize effects of variant annotations from VEP, SnpEff, et al.
  ☆34Updated 5 months ago
• quinlan-lab / pathoscore
  pathoscore evaluates variant pathogenicity tools and scores.
  ☆21Updated 3 years ago
• vidboda / MobiDetails
  WebApp for DNA variants interpretation
  ☆13Updated last week
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆56Updated last week
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 2 years ago
• refresh-bio / GTC
  GenoTypes Compressor
  ☆15Updated 2 years ago
• stjude-rust-labs / chainfile
  A crate for working with genomics chain files.
  ☆11Updated 4 months ago
• bigdatagenomics / cannoli
  Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.
  ☆40Updated 2 months ago
• amplab / smash
  Benchmarking toolkit for variant calling
  ☆47Updated 4 years ago
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆18Updated this week
• mutalyzer / description-extractor
  HGVS variant description extractor
  ☆11Updated 4 years ago
• ericminikel / minimal_representation
  Convert genetic variants to minimal representation
  ☆23Updated 7 years ago
• shiro-kur / PDIVAS
  Pathogenic Predictor of Deep-Intronic Variants causing Aberrant Splicing
  ☆9Updated 2 weeks ago
• personalis / hgvslib
  hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …
  ☆18Updated 2 years ago
• genomics-dev / variantkey
  Numerical Encoding for Human Genetic Variants
  ☆41Updated last year
• InscriptaLabs / BioCantor
  ☆22Updated last year
• nextflow-io / nf-sqldb
  SQL support plugin for Nextflow
  ☆26Updated this week
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 2 years ago
• diskin-lab-chop / AutoGVP
  ☆21Updated last month
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆88Updated last month
• MultiQC / test-data
  Test data for MultiQC.
  ☆22Updated last week