biocommons / anyvarLinks
Lightweight, portable variation registration and retrieval
☆16Updated this week
Alternatives and similar repositories for anyvar
Users that are interested in anyvar are comparing it to the libraries listed below
Sorting:
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆25Updated last month
- non-redundant, compressed, journalled, file-based storage for biological sequences☆47Updated 3 months ago
- A port of biocommons/hgvs to the Rust programming language☆16Updated 2 weeks ago
- Central repository for the VICC metakb web application☆15Updated last week
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Updated last week
- SQL support plugin for Nextflow☆32Updated 4 months ago
- WDL plugin for pytest☆48Updated 2 years ago
- Python client for GA4GH htsget protocol☆15Updated 3 years ago
- a cythonized, extended version of the interval search tree in bx☆30Updated 6 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- Transcript versions for HGVS libraries☆33Updated 3 months ago
- WDL tools for parsing, type-checking, and more☆28Updated 5 months ago
- Freelance bioinformaticians directory☆10Updated 3 years ago
- nRex: Germline and somatic single-nucleotide, short indel and structural variant calling☆12Updated 4 months ago
- ☆28Updated 4 months ago
- GA4GH Variation Representation Python Implementation☆61Updated last week
- A crate for working with genomics chain files.☆12Updated 6 months ago
- Tool suite for HGVS variant descriptions☆48Updated last week
- Monitor computational workflows in real time☆74Updated last year
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Updated 10 months ago
- A better, faster way to count guides in CRISPR screens.☆34Updated 10 months ago
- Parsing MHC nomenclature in the wild☆18Updated last week
- Curated collection of open-source bioinformatics tools☆28Updated 7 years ago
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆103Updated this week
- ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…☆23Updated last year
- Python wrapper around Nextflow.☆62Updated last week
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- Visualization and charting JS library for streaming genomic data☆19Updated last year
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 6 months ago
- Sparse Project VCF: evolution of VCF to encode population genotype matrices efficiently☆59Updated 2 years ago