Alternatives and similar repositories for galaxy-tricks

Users that are interested in galaxy-tricks are comparing it to the libraries listed below

• galaxyproject / cargo-port
  cache packages permanently
  ☆15Updated last year
• TGAC / earlham-galaxytools
  Galaxy tools and workflows developed at the Earlham Institute
  ☆14Updated 5 months ago
• nextflow-io / rmghc-2018
  Nextflow Workshop at Rocky Mountain Genomics HackCon 2018
  ☆10Updated 7 years ago
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆60Updated 9 months ago
• galaxyproject / awesome-galaxy
  Awesome resources related to Galaxy project
  ☆12Updated 9 months ago
• Molmed / checkQC
  CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
  ☆28Updated 2 months ago
• Ensembl / ensembl-tools
  Ensembl tools
  ☆35Updated 4 months ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆60Updated last year
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆78Updated last week
• vanOpijnenLab / MAGenTA
  ☆11Updated 8 years ago
• pnnl / hundo
  Snakemake-based amplicon processing protocol for 16S and ITS sequences.
  ☆13Updated last year
• BioinformaticsSpring2015 / BioinformaticsMaterials
  Syllabus and materials for bioinformatics lecture + lab
  ☆21Updated 10 years ago
• nickloman / ebov
  Ebola virus surveillance
  ☆15Updated 9 years ago
• davidebolo1993 / NanoR
  Nanopore data analysis in R
  ☆40Updated 2 years ago
• SGBC / galaksio
  An easy-to-use way for running Galaxy workflows.
  ☆20Updated 5 years ago
• MVesuviusC / primerTree
  PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs
  ☆52Updated this week
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 4 years ago
• geraldinepascal / FROGS
  FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.
  ☆31Updated 3 weeks ago
• dkoslicki / MetaPalette
  Metagenomic profiling and phylogenetic distances via common kmers
  ☆42Updated 4 years ago
• jbisanz / MicrobeR
  Handy tools for Microbiome analysis in R
  ☆18Updated 6 years ago
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆35Updated 2 years ago
• bow / crimson
  Bioinformatics tool outputs converter to JSON or YAML
  ☆35Updated 3 months ago
• nextgenusfs / amptk
  AMPtk: Amplicon ToolKit for NGS data (formally UFITS)
  ☆38Updated last year
• galaxyproject / galaxy-beta1
  Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…
  ☆12Updated 10 years ago
• rdpstaff / classifier
  RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s
  ☆58Updated 2 years ago
• lexnederbragt / developments-in-next-generation-sequencing
  Developments in next generation sequencing: instruments, read lengths, throughput. See
  ☆27Updated 7 years ago
• GenomiqueENS / dockerfiles
  ☆82Updated 3 years ago
• grenaud / deML
  Maximum likelihood demultiplexing
  ☆47Updated 7 months ago
• ukhsa-collaboration / PHEnix
  Public Health England SNP calling pipeline.
  ☆37Updated 7 years ago
• COMBINE-lab / wasabi
  Prepare Sailfish and Salmon output for downstream analysis
  ☆42Updated 6 years ago