Alternatives and similar repositories for galaxy-tricks

Users that are interested in galaxy-tricks are comparing it to the libraries listed below

• nextflow-io / rmghc-2018
  Nextflow Workshop at Rocky Mountain Genomics HackCon 2018
  ☆10Updated 7 years ago
• TGAC / earlham-galaxytools
  Galaxy tools and workflows developed at the Earlham Institute
  ☆14Updated 3 months ago
• usegalaxy-eu / galaxy-social
  Repository for democratising of Galaxy's social media activity - encourage collaboration, editing, peer-review of toots 🐘 and more
  ☆9Updated this week
• bionitio-team / bionitio
  Demonstrating best practices for bioinformatics command line tools
  ☆117Updated 4 years ago
• vanOpijnenLab / MAGenTA
  ☆11Updated 8 years ago
• usegalaxy-eu / ena-upload-cli
  ENA upload cli - script your Open Data upload to the European Nucleotide Archive
  ☆29Updated this week
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆61Updated 7 months ago
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆76Updated this week
• Molmed / checkQC
  CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
  ☆28Updated last week
• bgruening / galaxy-rna-workbench
  Galaxy RNA workbench
  ☆40Updated 4 years ago
• linsalrob / SRA_Metadata
  Get, parse, and extract information from the SRA metadata files
  ☆42Updated 2 years ago
• BioContainers / workflows
  Bioinformatics curated workflows that use Biocontainers tools
  ☆19Updated 6 years ago
• jbisanz / MicrobeR
  Handy tools for Microbiome analysis in R
  ☆18Updated 6 years ago
• nsoranzo / bioblend-tutorial
  ☆12Updated 3 years ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆61Updated last year
• GenomiqueENS / dockerfiles
  ☆82Updated 3 years ago
• usegalaxy-eu / website
  UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)
  ☆21Updated this week
• MVesuviusC / primerTree
  PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs
  ☆52Updated last year
• EnvGen / snakemake-workflows
  Common Snakemake rules and workflows mainly directed towards Metagenomic analysis.
  ☆21Updated 6 years ago
• pnnl / hundo
  Snakemake-based amplicon processing protocol for 16S and ITS sequences.
  ☆14Updated last year
• nh13 / snakeparse
  Making Snakemake workflows into full-fledged command line tools since 1999.
  ☆52Updated 7 years ago
• rioualen / gene-regulation
  Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.
  ☆11Updated 7 years ago
• BioinformaticsSpring2015 / BioinformaticsMaterials
  Syllabus and materials for bioinformatics lecture + lab
  ☆21Updated 10 years ago
• Ensembl / ensembl-tools
  Ensembl tools
  ☆35Updated 2 months ago
• SGBC / galaksio
  An easy-to-use way for running Galaxy workflows.
  ☆20Updated 5 years ago
• geraldinepascal / FROGS
  FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.
  ☆31Updated 2 months ago
• caporaso-lab / mockrobiota
  A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.
  ☆81Updated 6 years ago
• bioboxes / rfc
  Request for comments on interchangeable bioinformatics containers
  ☆40Updated 6 years ago
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 4 years ago
• nextflow-io / nf-hack18
  Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/
  ☆18Updated 6 years ago