Alternatives and similar repositories for rmghc-2018

Users that are interested in rmghc-2018 are comparing it to the libraries listed below

• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 5 years ago
• GenomiqueENS / dockerfiles
  ☆83Updated 3 years ago
• Molmed / checkQC
  CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
  ☆29Updated last month
• rioualen / gene-regulation
  Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.
  ☆11Updated 8 years ago
• najoshi / sabre
  ☆63Updated 5 years ago
• biocorecrg / BioNextflow
  A collection of modules and sub-workflows for Nextflow
  ☆28Updated 2 months ago
• COMBINE-lab / wasabi
  Prepare Sailfish and Salmon output for downstream analysis
  ☆42Updated 6 years ago
• nathanhaigh / 2019_EMBL-ABR_Snakemake_webinar
  Scripts and Snakemake pipeline used in the EMBL-ABR webinar
  ☆13Updated 6 years ago
• mjsull / HapFlow
  Visualise interstrain recombination from environmental samples.
  ☆26Updated 6 years ago
• gaitat / GenomeUPlot
  The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.
  ☆32Updated 3 years ago
• seandavi / Bioc2017BigDataWorkshopSession
  Tutorial for working with cloud infrastructure and AWS from R
  ☆20Updated 8 years ago
• MVesuviusC / primerTree
  PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs
  ☆52Updated 2 months ago
• Ensembl / ensembl-tools
  Ensembl tools
  ☆34Updated last month
• sk-sahu / sig-bio-shiny
  A standalone interactive application for detecting biological significance on a set of genes
  ☆40Updated 4 years ago
• s-andrews / BamQC
  Mapped QC analysis program
  ☆44Updated 7 years ago
• patidarr / annotation-pipeline
  ☆10Updated 8 years ago
• leipzig / snakemake-example
  RNA-Seq Snakemake example with Jekyll homepage creation
  ☆20Updated 11 years ago
• ssadedin / variant_calling_pipeline
  A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.
  ☆14Updated 12 years ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago
• miRTop / mirtop
  command lines tool to annotate miRNAs with a standard mirna/isomir naming
  ☆19Updated 8 months ago
• aryeelab / umi
  Preprocessing tools for unique molecular index (UMI) sequencing reads
  ☆31Updated 2 years ago
• nh13 / snakeparse
  Making Snakemake workflows into full-fledged command line tools since 1999.
  ☆51Updated 7 years ago
• bow / crimson
  Bioinformatics tool outputs converter to JSON or YAML
  ☆35Updated 6 months ago
• UW-GAC / analysis_pipeline
  TOPMed analysis pipeline
  ☆52Updated 2 years ago
• arq5x / bedtools-protocols
  ☆78Updated 11 years ago
• Przemol / seqplots
  SeqPlots - An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and he…
  ☆87Updated 3 years ago
• bgruening / galaxy-tricks
  Useful tricks and tipps for Galaxy users
  ☆12Updated 3 years ago
• pnnl / hundo
  Snakemake-based amplicon processing protocol for 16S and ITS sequences.
  ☆13Updated last year
• ewels / Labrador
  A web based tool to manage and automate the processing of publicly available datasets.
  ☆39Updated 4 years ago
• ngs-docs / angus
  Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
  ☆108Updated 2 years ago