Ensembl / ensembl-toolsLinks
Ensembl tools
☆34Updated last month
Alternatives and similar repositories for ensembl-tools
Users that are interested in ensembl-tools are comparing it to the libraries listed below
Sorting:
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- conda recipes for genomic data☆84Updated 4 years ago
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆127Updated 3 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆40Updated 8 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- An awk-like VCF parser☆56Updated last year
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- Galaxy RNA workbench☆40Updated 5 years ago
- Multi-sample somatic variant caller☆52Updated 3 years ago
- ☆83Updated 3 years ago
- ☆78Updated 11 years ago
- Exon-exon splice junctions across SRA☆42Updated 4 years ago
- ☆96Updated 3 years ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 7 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 10 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆126Updated 7 months ago
- Fast fusion detection using kallisto☆79Updated 5 months ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- Mapped QC analysis program☆44Updated 7 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 5 years ago
- A 3'-end adapter contaminant trimmer☆95Updated 7 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆56Updated last week
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆54Updated 8 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆33Updated 8 years ago
- Quality of RNA-Seq Toolset☆53Updated 6 years ago
- List of tools and resources related to the 10x Genomics GEMCode/Chromium system☆85Updated 6 years ago
- JHU EN.600.649: Computational Genomics: Applied Comparative Genomics☆58Updated 7 years ago
- simple comparison of snakemake, nextflow and cromwell/wdl☆50Updated 5 years ago