Ensembl / ensembl-tools
Ensembl tools
☆34Updated 2 months ago
Alternatives and similar repositories for ensembl-tools:
Users that are interested in ensembl-tools are comparing it to the libraries listed below
- ☆78Updated 10 years ago
- Galaxy RNA workbench☆39Updated 4 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Maximum likelihood demultiplexing☆46Updated last year
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆65Updated 2 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 9 years ago
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆33Updated 7 years ago
- A tool to benchmark mappers and different parameters within minutes☆43Updated 5 years ago
- ☆94Updated 2 years ago
- High-performance error correction for Illumina resequencing data☆69Updated 8 years ago
- Mutation Identification Pipeline. Read the latest documentation:☆44Updated 10 months ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated last year
- An awk-like VCF parser☆55Updated last year
- Quality of RNA-Seq Toolset☆52Updated 5 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Updated 4 years ago
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆67Updated last year
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆48Updated 5 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆55Updated 7 years ago
- Splice junction analysis and filtering from BAM files☆39Updated 2 years ago
- Automatically exported from code.google.com/p/ea-utils☆95Updated last year
- A Python library for reading and writing PacBio® data files☆40Updated this week
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆48Updated 4 years ago
- mtDNA Variant Caller☆33Updated 3 weeks ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆45Updated this week
- Exome/Capture/RNASeq Pipeline Implementation using snakemake☆45Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 2 years ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆57Updated this week