Ensembl / ensembl-toolsLinks
Ensembl tools
☆35Updated 4 months ago
Alternatives and similar repositories for ensembl-tools
Users that are interested in ensembl-tools are comparing it to the libraries listed below
Sorting:
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- conda recipes for genomic data☆85Updated 4 years ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 7 years ago
- ☆95Updated 2 years ago
- ☆78Updated 11 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- Sanity check Variant Call Format (VCF) files.☆37Updated 9 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Rapid Mapping-based Isoform Quantification from RNA-Seq Reads☆126Updated 3 years ago
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆35Updated 8 years ago
- An interactive web-tool for RNA-seq analysis☆68Updated 6 months ago
- Multi-sample somatic variant caller☆52Updated 3 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Galaxy RNA workbench☆40Updated 4 years ago
- ☆82Updated 3 years ago
- (DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER☆31Updated 6 years ago
- Genome-wide imputation pipeline☆32Updated last year
- An awk-like VCF parser☆56Updated last year
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- R package for inferring copy number from read depth☆32Updated 2 years ago
- Exon-exon splice junctions across SRA☆42Updated 4 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆122Updated 3 months ago
- JHU EN.600.649: Computational Genomics: Applied Comparative Genomics☆58Updated 7 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆40Updated 4 years ago
- Validate FastQ Files☆36Updated 6 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Maximum likelihood demultiplexing☆47Updated 6 months ago
- Identifying recurrent mutations in cancer☆37Updated 4 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 9 years ago