☆21Oct 24, 2020Updated 5 years ago
Alternatives and similar repositories for h3agatk
Users that are interested in h3agatk are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GWAS Pipeline for H3Africa☆115Mar 12, 2026Updated 2 months ago
- H3ABioNet 16S rDNA diverstity analysis package☆19May 20, 2019Updated 7 years ago
- An online tool for annotating, filtering and diagnosing patients (Exome and Genome) with Mendelian Disorders.☆36May 16, 2026Updated last week
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Jul 29, 2019Updated 6 years ago
- Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees…☆26Nov 14, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Generic Interactive Variant Analysis browser☆29Apr 12, 2022Updated 4 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Nov 17, 2021Updated 4 years ago
- A Shiny wrapper for the UpSetR R package (https://github.com/hms-dbmi/UpSetR).☆21Aug 28, 2017Updated 8 years ago
- This is a Genome Annotation Framework developed with the goal of annotating VCF files (Exomes or Genomes) from patients with Mendelian Di…☆23May 16, 2026Updated last week
- Generating tool descriptors from bio.tools☆10Jun 13, 2018Updated 7 years ago
- CWL for GDC DNASeq workflows☆23Mar 30, 2026Updated last month
- Nextflow implementation of the smoove workflow and other tools for SV calling and QC☆12Nov 12, 2020Updated 5 years ago
- Amazon Web Services Bundle Package☆15Jan 12, 2020Updated 6 years ago
- Easily run WDL workflows on GCP☆14Sep 28, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- a string to graph aligner☆41Jul 5, 2016Updated 9 years ago
- Gene Exploration System for Variance☆22Dec 8, 2022Updated 3 years ago
- gnomAD browser pre-ASHG 2018☆33Nov 2, 2020Updated 5 years ago
- Open workflow definitions for genomic analysis from MGI at WUSM.☆105Jun 23, 2025Updated 11 months ago
- Somatic Variant Call for ctDNA☆12Mar 1, 2016Updated 10 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Sep 21, 2022Updated 3 years ago
- Population Reference Graphs for the HLA and MHC.☆35Dec 18, 2018Updated 7 years ago
- ☆31Aug 9, 2013Updated 12 years ago
- Deprecated, see https://labsyspharm.github.io/rnaseq/☆12Feb 28, 2019Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An easy-to-use way for running Galaxy workflows.☆20Nov 19, 2019Updated 6 years ago
- SlideJ: an ImageJ plugin for WSI processing☆16Nov 7, 2019Updated 6 years ago
- Repository for development of the genomic module of the CDM.☆25Jun 14, 2019Updated 6 years ago
- Joint calling of gVCF, following GATK4 Best Practices☆12Apr 3, 2019Updated 7 years ago
- ☆14Jan 8, 2016Updated 10 years ago
- Materials for http://dib-training.readthedocs.org/en/pub/2015-11-09-docker.html☆14May 29, 2017Updated 9 years ago
- In process work on active learning tutorials☆10Feb 19, 2024Updated 2 years ago
- ☆82Nov 30, 2018Updated 7 years ago
- Genotype Imputation Pipeline for H3Africa☆25Nov 5, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆36Jun 26, 2025Updated 11 months ago
- Website to analyze conflicting assertions in ClinVar☆19Mar 16, 2026Updated 2 months ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Nov 4, 2019Updated 6 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Reproducible Workflows, curated at the Fred Hutch☆12Jan 21, 2026Updated 4 months ago
- ☆15Mar 6, 2020Updated 6 years ago
- Obsolete/Legacy GATK repository -- go to https://github.com/broadinstitute/gatk instead☆32Aug 16, 2017Updated 8 years ago