WGLab / biocluster
Tutorial on building a computing cluster for bioinformatics
☆86Updated last year
Alternatives and similar repositories for biocluster:
Users that are interested in biocluster are comparing it to the libraries listed below
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 2 years ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 6 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆80Updated 5 months ago
- Documentation and description of AWS iGenomes S3 resource.☆114Updated 5 months ago
- Genomic Interactive Visualization Engine☆145Updated 2 years ago
- Galaxy RNA workbench☆40Updated 4 years ago
- Documenting usage and experience with bioinformatic tools☆41Updated 9 years ago
- Automatically exported from code.google.com/p/ea-utils☆96Updated last year
- ABRA2☆92Updated 2 years ago
- ☆68Updated 2 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- This repository contains information about latest release from Genome in a Bottle project☆74Updated 5 years ago
- Concordance and contamination estimator for tumor–normal pairs☆58Updated 6 months ago
- FusionInspector code☆57Updated 5 months ago
- ☆82Updated 3 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- ☆57Updated 5 years ago
- Tip and tricks for BAM files☆85Updated 6 years ago
- This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are al…☆78Updated 5 years ago
- Relevant papers for CNV and SV approaches☆94Updated 6 months ago
- A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, …☆61Updated 5 years ago
- Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer☆97Updated 4 years ago
- ☆78Updated 11 years ago
- Tools for early stage alignment file processing☆93Updated 6 years ago
- ☆94Updated 2 years ago
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆53Updated 7 years ago
- fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome☆148Updated 8 months ago
- Next-Generation Sequencing(NGS) toolkits.☆45Updated 9 years ago
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆158Updated 2 years ago
- Reference-free duplex sequencing pipeline.☆18Updated 2 years ago