phylobayes mpi
☆28Feb 3, 2023Updated 3 years ago
Alternatives and similar repositories for pbmpi
Users that are interested in pbmpi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Oct 21, 2021Updated 4 years ago
- Visualize and perform a multitude of operations on newick files☆17Mar 7, 2022Updated 4 years ago
- MPBoot: Fast phylogenetic maximum parsimony tree inference and bootstrap approximation☆21Dec 4, 2024Updated last year
- IQ-TREE version 3: software for phylogenetics☆141May 26, 2026Updated 2 weeks ago
- A Python library that exposes features from IQ-TREE - efficient software for phylogenomic inference☆49Jun 3, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language☆86Updated this week
- Scalable Maximum Likelihood Estimation of Phylogenetic Models☆26Mar 7, 2025Updated last year
- Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape☆10Jun 11, 2022Updated 3 years ago
- visualization of phylogenetic output files☆14Oct 23, 2023Updated 2 years ago
- MP-EST estimates species trees from a set of gene trees by maximizing a pseudo-likelihood function☆13Oct 31, 2025Updated 7 months ago
- Synteny matrix representation with maximum likelihood pipeline☆16Jul 7, 2021Updated 4 years ago
- PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. Please report only **techni…☆197Jan 29, 2026Updated 4 months ago
- ☆13May 15, 2026Updated 3 weeks ago
- Script that labels phylogenetic clades based on the clade of the nearest neighbor using patristic distances determined from the tree.☆15Dec 11, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆20Jun 15, 2024Updated last year
- ☆11Dec 12, 2024Updated last year
- mPTP - a tool for single-locus species delimitation☆30Mar 14, 2026Updated 2 months ago
- Clann: Investigation of phylogenomic signal using supertrees☆18Apr 21, 2026Updated last month
- a fork of the gap-closing pipeline PBJelly☆15Jan 7, 2019Updated 7 years ago
- MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentati…☆269Jan 9, 2026Updated 5 months ago
- Reproducible Phylogenomics☆22Jun 28, 2016Updated 9 years ago
- waka waka☆18Mar 18, 2021Updated 5 years ago
- PredictDB Pipeline for GTEx v7 data☆18Nov 9, 2022Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Detecting NUMTs from WGS☆13Nov 19, 2023Updated 2 years ago
- An R package to infer and analyze synteny networks from protein sequences☆40Jul 23, 2025Updated 10 months ago
- Orthology prediction using a graph-based, reciprocal approach with profile hidden Markov models☆33Jan 7, 2022Updated 4 years ago
- ☆16Dec 7, 2020Updated 5 years ago
- A Rust-based library for phylogenetic analysis and manipulation☆20May 13, 2026Updated 3 weeks ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- TreeCmp: comparison of trees in polynomial time☆14Aug 25, 2025Updated 9 months ago
- ☆13Feb 26, 2024Updated 2 years ago
- Posterior summarisation in Bayesian phylogenetics☆73Sep 27, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Easy deployment of docker containers over ssh☆11Jul 6, 2015Updated 10 years ago
- Create, modify and analyse phylogenetic trees in R☆24Jun 3, 2026Updated last week
- Align multiple amino acid or nucleotide sequences.☆86Sep 17, 2020Updated 5 years ago
- A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".☆25May 3, 2026Updated last month
- ☆13Mar 28, 2018Updated 8 years ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆466May 29, 2026Updated last week
- coevol -- Correlated evolution of substitution rates and quantitative traits☆13Oct 18, 2024Updated last year