Reproducible Phylogenomics
☆22Jun 28, 2016Updated 10 years ago
Alternatives and similar repositories for ReproPhylo
Users that are interested in ReproPhylo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Nov 16, 2015Updated 10 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Bryan talk at JSM 2015 re: are statisticians data scientists☆18Oct 30, 2015Updated 10 years ago
- Code and data associated with Duffy, James, and Longworth Applied and Environmental Microbiology paper describing the ecology, virulence,…☆11May 8, 2018Updated 8 years ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Jun 28, 2017Updated 9 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Site Identification from Short Read Sequences.☆24Nov 2, 2021Updated 4 years ago
- Clustering phylogenetic trees with python☆26Aug 14, 2024Updated last year
- Implementing semantically rich NeXML I/O in R☆15May 6, 2024Updated 2 years ago
- Phylocom R interface☆15Apr 21, 2023Updated 3 years ago
- A list of weak Bacterial assemblies in GenBank☆18Aug 3, 2017Updated 8 years ago
- PNNL TES incubation of CPCRW soil cores #openexperiment☆12Aug 29, 2017Updated 8 years ago
- Syllabus and materials for bioinformatics lecture + lab☆21Apr 23, 2015Updated 11 years ago
- Streamable FASTA parser.☆14May 18, 2026Updated last month
- Quickly generate consensus assemblies for bacterial genomes☆14Sep 12, 2025Updated 9 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Using BOSC2015 unconference sessions on building successful open source bioinformatics communities to write an open collaborative article☆16Nov 20, 2015Updated 10 years ago
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆214Aug 21, 2024Updated last year
- Python version of PHLAWD☆23Oct 28, 2024Updated last year
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47May 27, 2022Updated 4 years ago
- High-performance error correction for Illumina resequencing data☆75May 31, 2016Updated 10 years ago
- Course webpage and materials for biol607, Intro to Computational Data Analysis for Biology, at UMass Boston☆18Apr 25, 2025Updated last year
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 9 years ago
- The Dazzler Data Base☆36Feb 17, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repository of script tools, examples, and contributed code for using the MG-RAST API☆25Mar 22, 2021Updated 5 years ago
- Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)☆11May 3, 2024Updated 2 years ago
- Abbreviate strings to short, unique identifiers☆24May 10, 2022Updated 4 years ago
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆32Jan 22, 2016Updated 10 years ago
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 8 years ago
- de novo targeted gene assembly☆22Apr 16, 2021Updated 5 years ago
- (check out instaGRAAL for a faster, updated program!) This program is from Marie-Nelly et al., Nature Communications, 2014 (High-qualit…☆15Nov 22, 2022Updated 3 years ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 6 years ago
- Experiments for "Scaling read aligners to hundreds of threads on general-purpose processors"☆11Jun 8, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Creating virtual environments for R.☆17Oct 24, 2019Updated 6 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Mar 17, 2022Updated 4 years ago
- ☆18Mar 5, 2017Updated 9 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 9 years ago
- initial commit☆27Dec 29, 2022Updated 3 years ago
- ☆11Mar 10, 2021Updated 5 years ago
- An ultra light YAML-based pipeline execution engine☆20Aug 30, 2017Updated 8 years ago