A PCR primer tool for DNA assembly flows
β33Apr 24, 2024Updated 2 years ago
Alternatives and similar repositories for primers
Users that are interested in primers are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a JavaScript DNA, RNA, and protein sequence viewerβ328Updated this week
- 𧬠MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotationsβ38May 21, 2024Updated 2 years ago
- repository-based plasmid designβ31Nov 28, 2022Updated 3 years ago
- Short overhangs design for DNA assemblyβ15Jun 8, 2022Updated 4 years ago
- User-friendly software for viewing and processing Sanger DNA sequencing trace files.β34Mar 27, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assembliesβ66May 12, 2025Updated last year
- β25Updated this week
- Coarse-grained simulations of biomolecular complexesβ13Aug 2, 2023Updated 3 years ago
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloningβ¦β228Updated this week
- A biological dual-language foundation modelβ11Jun 16, 2025Updated last year
- A easy-to-use Python API for Primer3 primer design.β16Nov 10, 2022Updated 3 years ago
- A pure Python implementation of the SBOL standard.β21Updated this week
- Predict DNA assembly clone validity rates - powered by Kappaβ10Jul 24, 2020Updated 6 years ago
- Metagenomic search for novel CRISPR-transposonsβ12Sep 30, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean β’ AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Software for predicting translation initiation rates in bacteriaβ34Jul 30, 2025Updated last year
- β12Mar 12, 2026Updated 5 months ago
- Parse sequence files (GenBank, FASTA, SnapGene, SBOL) and accession IDs (NCBI, iGEM) to a common formatβ19Mar 27, 2026Updated 4 months ago
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.β14Oct 18, 2021Updated 4 years ago
- ABIF parser, writer and generatorβ11Dec 8, 2023Updated 2 years ago
- Unified graphics deviceβ28Apr 20, 2026Updated 3 months ago
- waka wakaβ18Mar 18, 2021Updated 5 years ago
- πΊ Plot DNA digestion band patterns with Pythonβ20May 12, 2025Updated last year
- The Fluorescent Protein Databaseβ82Updated this week
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python utilities for handling Rosetta output and PDB filesβ16Sep 26, 2011Updated 14 years ago
- A versatile DNA sequence optimizerβ278Nov 5, 2025Updated 9 months ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.β32Apr 9, 2025Updated last year
- Pembrolizumab-like Antibody Hallucination using AlphaFold2β16Nov 10, 2023Updated 2 years ago
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.β47Sep 20, 2020Updated 5 years ago
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.β17Jan 29, 2024Updated 2 years ago
- VStrains is a de novo approach for reconstructing strains from viral quasispecies.β24Feb 22, 2026Updated 5 months ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.β26Feb 13, 2025Updated last year
- RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8β71Apr 10, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Sequence-independent identification and removal of adapters/systemic contamination in shotgun sequencing data. https://doi.org/10.1093/biβ¦β19Apr 4, 2023Updated 3 years ago
- β30Aug 8, 2025Updated last year
- Sequencing analysis pipelineβ16Dec 12, 2025Updated 8 months ago
- a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.β17May 30, 2021Updated 5 years ago
- SBOL Designer Projectβ31Jun 4, 2021Updated 5 years ago
- VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.β20Sep 12, 2021Updated 4 years ago
- Motif manipulation functions for R.β34Jun 25, 2026Updated last month