Error correction of long reads
☆16Jan 30, 2026Updated 9 months ago
Alternatives and similar repositories for HALE
Users that are interested in HALE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pangenome graph-based genome inference☆14Jul 24, 2025Updated last year
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 11 months ago
- A short tandem repeat (STR) genotyping and analysis toolkit for long reads☆22Oct 15, 2026Updated 2 weeks ago
- A newly designed version of Bamsnap with Long Read Support (LRS) which inspired by bamsnap (https://github.com/parklab/bamsnap)☆14Oct 13, 2026Updated 2 weeks ago
- Kmer Analysis of Pileups for Genotyping☆43Jul 16, 2026Updated 3 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- PHasing Reads in Areas Of Homozygosity☆14Feb 12, 2025Updated last year
- ☆12Aug 17, 2024Updated 2 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 3 years ago
- A filter algorithm with program to filter an alignment or mapping file☆13May 15, 2025Updated last year
- Tools for working with agp files☆20Jun 26, 2025Updated last year
- Isoform Identification and Quantification via Long Read RNA-Seq☆17Updated this week
- A fast, robust and accurate variant calling software for human germline DNA analysis☆15Jun 30, 2026Updated 4 months ago
- ☆14Sep 20, 2026Updated last month
- ATaRVa - Analysis of Tandem Repeat Variation☆25Sep 3, 2026Updated last month
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Panaln: Indexing pangenome for read alignment☆10Apr 16, 2025Updated last year
- Fast long-read RNA-seq mapping to a transcriptome with locally consistent parsing☆21Updated this week
- Fast and memory efficient partial order alignment with minipoa