anhtr / HPAanalyzeLinks
A Bioconductor package to retrieve and analyze data from the Human Protein Atlas
☆38Updated 4 months ago
Alternatives and similar repositories for HPAanalyze
Users that are interested in HPAanalyze are comparing it to the libraries listed below
Sorting:
- An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…☆110Updated last week
- Topics In Data Science and Bioinformatics☆79Updated last year
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated last week
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- Interactive Cytometry Data Analysis☆67Updated 2 weeks ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 3 months ago
- LDlinkR☆60Updated last year
- DEP package☆28Updated 3 years ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆67Updated 2 months ago
- A General Framework for Consensus Partitioning☆63Updated 8 months ago
- An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app☆49Updated 4 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Updated 2 years ago
- Clone of the Bioconductor repository for the basilisk package.☆29Updated last month
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Cancer Dependency Map package☆30Updated last year
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 4 months ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- Course Materials for Genomics Data Mining☆22Updated last month
- Tools for manipulating annotated data matrices☆92Updated 4 years ago
- An R package to plot interactive three-way differential expression analysis☆38Updated 2 years ago
- R package for querying the DrugBank database in batch locally☆37Updated 4 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 4 years ago
- MSigDB gene sets for multiple organisms in a tidy data format☆83Updated 2 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Bioconductor facilities for parallel evaluation☆68Updated last month
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- Gene-level general linear mixed model☆23Updated 2 weeks ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 9 months ago