andrewparkermorgan / argyleLinks
An R package for import, QC and analysis of Illumina Infinium genotyping arrays
☆35Updated 7 years ago
Alternatives and similar repositories for argyle
Users that are interested in argyle are comparing it to the libraries listed below
Sorting:
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆52Updated 6 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Glimma R package☆50Updated last year
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆62Updated 7 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆38Updated 2 years ago
- R package for genomic feature analysis and visualization☆79Updated 8 months ago
- Tools for visualizing genomics data☆69Updated 4 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆40Updated 8 years ago
- R package wrapping bedtools☆44Updated 9 months ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆23Updated 2 years ago
- combining p-values using modified stouffer-liptak for spatially correlated results (probes)☆46Updated 3 years ago
- ☆33Updated 3 years ago
- An R for fast and flexible DNA methylation analysis☆35Updated 2 weeks ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- ☆29Updated 6 years ago
- Read PLINK BED/BIM/FAM files into R☆44Updated 4 years ago
- Functional genomics and genome-wide association studies☆69Updated 7 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 3 weeks ago
- Representation and manipulation of genomic intervals☆46Updated 3 weeks ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated last week
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated 2 months ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆32Updated 9 months ago
- Devel repository for minfi☆64Updated last year
- TOPMed analysis pipeline☆52Updated 2 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Generalized linear Mixed Model Association Tests☆44Updated last month