andrewparkermorgan / argyle
An R package for import, QC and analysis of Illumina Infinium genotyping arrays
☆34Updated 7 years ago
Alternatives and similar repositories for argyle:
Users that are interested in argyle are comparing it to the libraries listed below
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆34Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- An interactive graphical illustration of genetic associations and their biological context☆16Updated last year
- ☆30Updated 3 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- ☆25Updated 11 months ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆28Updated last month
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- Generalized linear Mixed Model Association Tests☆42Updated last year
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- An R for fast and flexible DNA methylation analysis☆32Updated 9 months ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- ☆28Updated 9 months ago
- Genomic plot in trellis layout☆39Updated last year
- R package to perform Bayesian Genome-Wide Association Studies☆39Updated last year
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated last month
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- tools to efficiently retrieve and calculate LD☆33Updated 3 years ago
- Glimma R package☆50Updated 8 months ago
- software package for integrative genetic association analysis☆34Updated last year
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆42Updated 3 years ago
- ☆22Updated 8 years ago
- Tools for visualizing genomics data☆67Updated 3 years ago
- Representation and manipulation of genomic intervals☆45Updated 2 weeks ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 5 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆41Updated 7 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 9 months ago