jigold / zCallLinks
A Rare Variant Caller for Array-based Genotyping
☆25Updated 10 years ago
Alternatives and similar repositories for zCall
Users that are interested in zCall are comparing it to the libraries listed below
Sorting:
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆33Updated 8 years ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆84Updated 2 months ago
- Script to convert GTC/BPM files to VCF☆47Updated 3 weeks ago
- Burden testing against public controls☆50Updated last year
- Copy number vaiation detection from SNP arrays☆96Updated last year
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- ☆40Updated 7 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Updated 5 years ago
- An awk-like VCF parser☆56Updated last year
- ☆78Updated 11 years ago
- Simple vcf parser, based on PyVCF☆47Updated 6 years ago
- Generic human DNA variant annotation pipeline☆58Updated last year
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆56Updated 5 years ago
- R package designed to simplify structural variant analysis☆73Updated 3 years ago
- ☆69Updated 3 years ago
- ☆82Updated 6 years ago
- Mutation Identification Pipeline. Read the latest documentation:☆47Updated last year
- ☆27Updated 5 months ago
- List of IARC bioinformatics pipelines and resources☆53Updated last week
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆55Updated 5 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 10 years ago
- Visualization and annotation of CNVs from population-scale whole-genome sequencing data☆72Updated 7 years ago
- Sanity check Variant Call Format (VCF) files.☆37Updated 9 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆32Updated 9 years ago
- Read visualizer for structural variants☆84Updated 7 years ago
- MOsaic CHromosomal Alterations (MoChA) caller☆88Updated 2 months ago
- Analysis pipeline for cancer sequencing data☆111Updated 6 months ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Data and information about the Polaris study☆54Updated 5 years ago