processing illumina SNP arrays
☆20Feb 3, 2017Updated 9 years ago
Alternatives and similar repositories for illumina-array-protocols
Users that are interested in illumina-array-protocols are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Mar 20, 2018Updated 8 years ago
- Materials for http://dib-training.readthedocs.org/en/pub/2015-11-09-docker.html☆14May 29, 2017Updated 9 years ago
- A complete suite of tools to work with genomic variation data, from VCF tools to variant profiling or genomic statistics☆14Feb 12, 2016Updated 10 years ago
- Benchmarking pipeline for single-cell perturbation prediction tools☆34Jul 11, 2025Updated 11 months ago
- ☆13May 13, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A Rare Variant Caller for Array-based Genotyping☆25Feb 25, 2015Updated 11 years ago
- From IDAT to beta.☆25Jul 13, 2018Updated 7 years ago
- A collection of Fabric utilities largely for Django deployment.☆28Apr 15, 2013Updated 13 years ago
- Scripts used in the analysis of C elegans dRNAseq data☆14Apr 7, 2024Updated 2 years ago
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Jun 16, 2016Updated 10 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆54Feb 1, 2019Updated 7 years ago
- Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.☆10Apr 19, 2016Updated 10 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 9 months ago
- Variant to disease dataset workflows for Open Targets Genetics☆14May 11, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Report reverse and ambiguous strand SNPs in GWAS data☆34May 15, 2019Updated 7 years ago
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- Program for estimating admixture proportions and doing principal component analysis of a single NGS sample☆12Aug 15, 2024Updated last year
- ☆31Aug 9, 2013Updated 12 years ago
- Script to convert GTC/BPM files to VCF☆48Oct 13, 2025Updated 8 months ago
- A high-throughput analysis framework for Y-chromosomal next-generation sequencing data☆17Jun 11, 2021Updated 5 years ago
- Odyssey: A semi-automated pipeline for the prepping, cleaning, phasing, imputing, analyzing, and visualizing genomic data☆19May 28, 2021Updated 5 years ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- Blogpost about installing packages and getting package dependencies☆17Aug 9, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 7 months ago
- a simple C++ library for parsing and manipulating VCF files, + many command-line utilities☆20Mar 22, 2017Updated 9 years ago
- Geneyx Analysis API☆12Jun 10, 2026Updated 2 weeks ago
- Long RNA-seq analysis workflow☆23Oct 13, 2025Updated 8 months ago
- ☆14Jan 8, 2016Updated 10 years ago
- Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF☆162Feb 26, 2026Updated 4 months ago
- Website☆16Aug 30, 2025Updated 10 months ago