Alternatives and similar repositories for awesome-multitrait-gwas:

Users that are interested in awesome-multitrait-gwas are comparing it to the libraries listed below

• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆46Updated 5 months ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• xinhe-lab / ctwas
  package for the causal TWAS project
  ☆41Updated 2 weeks ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆34Updated last year
• thewonlab / H-MAGMA
  ☆32Updated last year
• clagiamba / moloc
  ☆34Updated 4 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆42Updated 6 years ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆24Updated 2 years ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆17Updated 9 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆51Updated 4 months ago
• FinucaneLab / gene_features
  ☆31Updated last year
• mikelove / mrlocus
  Older repo for MRLocus. See new website for software usage guide:
  ☆15Updated last year
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 9 months ago
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆28Updated 11 months ago
• hakyimlab / gtex-gwas-analysis
  ☆22Updated 3 years ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆31Updated 4 years ago
• yanglab-emory / TIGAR
  ☆21Updated 4 months ago
• rivas-lab / public-resources
  Repository for resources we'd like to share with the community.
  ☆24Updated 3 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• opentargets / genetics-sumstat-harmoniser
  Harmonise GWAS summary statistics against a reference VCF
  ☆41Updated 3 years ago
• leelabsg / SKAT
  Sequence kernel association test (SKAT)
  ☆47Updated last month
• weizhou0 / GATE
  ☆22Updated last year
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆23Updated 3 years ago
• FinucaneLab / pops
  ☆76Updated 2 years ago
• ajaynadig / bhr
  Suite of heritability and genetic correlation estimation tools for exome-sequencing data
  ☆33Updated last month
• hbliu / Kidney_Epi_Pri
  Kidney Epigenome and Transcriptome-based multi-stage Prioritization
  ☆17Updated 2 years ago
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆31Updated 3 weeks ago
• powellgenomicslab / onek1k_phase1
  Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types
  ☆27Updated 3 years ago