Differential expression analysis: DESeq2, edgeR, limma. Realized in python based on rpy2
☆15May 7, 2021Updated 4 years ago
Alternatives and similar repositories for DE_rpy2
Users that are interested in DE_rpy2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Apr 8, 2023Updated 2 years ago
- Python script to comvert Philips iSyntax files to OME-TIFF☆14Dec 30, 2022Updated 3 years ago
- Literature reviews of (Unsupervised/self-supervised) pretraining on medical datasets☆18Jan 16, 2024Updated 2 years ago
- Interpretable bimodal network for transcription factors binding site prediction☆10Jun 29, 2023Updated 2 years ago
- Brief tutorial illustrating gprof and AMD uProf☆10Aug 8, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆44Dec 11, 2024Updated last year
- Colored Kimia Path24 Dataset: Configurations and Benchmarks with Deep Embeddings☆10Jun 6, 2024Updated last year
- Inspired from the paper "Show Attend and Tell". This project's aim was to train a neural network which can provide descriptive text for a…☆13Feb 7, 2021Updated 5 years ago
- Supplementary files for our Aneuploidy Detection paper☆10Jul 5, 2018Updated 7 years ago
- 命例☆10Sep 27, 2018Updated 7 years ago
- Peak calling tool for CLIP-seq data☆14Apr 7, 2021Updated 4 years ago
- ☆30Aug 18, 2023Updated 2 years ago
- Android app saving RGB + Depth images with their ARPose of Huawei phones (Honor 20 View; Huawei P30 Pro...) with Tof sensor (using AREng…☆15Sep 8, 2021Updated 4 years ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆38Nov 8, 2017Updated 8 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Download ABIDE I and ABIDE II dataset☆13May 12, 2021Updated 4 years ago
- Code accompanying the paper "Fighting Class Imbalance with Contrastive Learning" (MICCAI2021)☆10Nov 24, 2021Updated 4 years ago
- DiffInfinite Official Code☆37Oct 30, 2024Updated last year
- The snakemake interface, currently works like a notebook (under development)☆20Mar 12, 2026Updated 2 weeks ago
- This repository contains the all my ML KIT projects using flutter.☆13Oct 10, 2022Updated 3 years ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Mar 31, 2023Updated 2 years ago
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 5 years ago
- Simple scVI implementation☆12Mar 16, 2026Updated last week
- ☆16May 25, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Implementation of Stochastic Depth Networks in Keras☆13Sep 10, 2016Updated 9 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Oct 26, 2018Updated 7 years ago
- ☆11Sep 22, 2021Updated 4 years ago
- Manipulate KEGG networks as NetworkX objects in in Python☆10Jan 21, 2022Updated 4 years ago
- ☆22Jun 14, 2025Updated 9 months ago
- ☆13Apr 1, 2023Updated 2 years ago
- Tumor-Infiltrating CD8 Lymphocytes states prediction☆14Feb 7, 2024Updated 2 years ago
- SSR: A Unifed Framework for Prediction in Secondary Structure of RNA. 整合了LinearFold, E2Efold, MXfold2算法，包含数据集，欢迎一键使用。☆10Dec 31, 2021Updated 4 years ago
- Code for "Random Features Strengthen Graph Neural Networks" (SDM 2021)☆22Jan 18, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…☆12Jul 31, 2015Updated 10 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Jun 14, 2024Updated last year
- 自用ChatGPT降低AI率机器人☆28May 8, 2025Updated 10 months ago
- 生物信息学入门的系列课程，包括Linux, shell, Python 编程，建库测序，基因组学，以及系统进化，常用软件使用等内容。☆23Sep 16, 2021Updated 4 years ago
- VEGA: VAE Enhanced by Gene Annotations☆17May 5, 2022Updated 3 years ago
- A Data Visualization project on the French traffic accidents database☆19Aug 27, 2019Updated 6 years ago
- Custom Keras Callbacks for Feature Visualization, Class Activation Map, Grad-CAM☆16Apr 28, 2021Updated 4 years ago