alexandrovteam / pyimzMLLinks
A parser to read .imzML files with python
☆40Updated 7 months ago
Alternatives and similar repositories for pyimzML
Users that are interested in pyimzML are comparing it to the libraries listed below
Sorting:
- Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.☆11Updated 3 years ago
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆50Updated this week
- Reference pipeline for FDR-controlled metabolite annotation for imaging mass spectrometry☆19Updated 8 years ago
- Mass spectrometry imaging applications for interactive analysis in MITK (M²aia)☆21Updated this week
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆32Updated last month
- MS/MS prediction for peptides☆22Updated 4 years ago
- rMSI processing methods using C++☆11Updated 3 years ago
- ☆37Updated 2 months ago
- File format for 96-well plate layouts.☆23Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆24Updated last month
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆68Updated 2 weeks ago
- A collection of available Python tools for Proteomics analysis☆56Updated 6 years ago
- Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data☆11Updated 3 years ago
- Infrastructure of AlphaX ecosystem☆37Updated last week
- Mass spectrometry imaging toolbox☆58Updated 5 months ago
- modular & open DIA search☆71Updated this week
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆23Updated last year
- MAss spectra alignment tool for MSI data☆19Updated 3 years ago
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆34Updated 11 months ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆82Updated 2 months ago
- Evaluating batch correction methods for image-based cell profiling☆14Updated 5 months ago
- ☆62Updated last year
- R package for functionally scoring phosphorylation sites☆19Updated 5 years ago
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆20Updated last week
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆56Updated last month
- Optimizing the Cell Painting assay for image-based profiling☆20Updated 5 months ago
- EuBIC 2023 developer's meeting☆13Updated 2 years ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆48Updated 2 weeks ago
- Imputing proteomics data using deep learning models☆22Updated last week
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 3 years ago