alexandrovteam / pySMLinks
Reference pipeline for FDR-controlled metabolite annotation for imaging mass spectrometry
☆20Updated 8 years ago
Alternatives and similar repositories for pySM
Users that are interested in pySM are comparing it to the libraries listed below
Sorting:
- Chemical Similarity Enrichment analysis of metabolomics datasets☆29Updated 11 months ago
- A collection of common mz values found in mass spectrometry.☆20Updated last year
- ☆11Updated 3 years ago
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆50Updated 3 weeks ago
- R package for optimized LC-MS spectra processing☆25Updated 2 months ago
- pathway and network analysis for metabolomics☆41Updated last year
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- ☆17Updated 5 years ago
- Defined MRM transitions from untargeted metabolomics data☆10Updated last year
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Updated 2 years ago
- ☆55Updated 4 years ago
- ☆14Updated 2 years ago
- MS/MS prediction for peptides☆23Updated 4 years ago
- Mass spectrometry imaging applications for interactive analysis in MITK (M²aia)☆22Updated last month
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆14Updated this week
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆20Updated last month
- Construct database and identify metabolites.☆6Updated 2 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 4 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- MetNormalizer is used to normalize large scale metabolomics data.☆22Updated 4 years ago
- R package for MetFrag☆24Updated 7 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆52Updated 3 years ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆15Updated 8 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- Shiny app for retention time prediction☆9Updated 5 years ago
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆28Updated 11 months ago
- An open-source Python package to unify raw MS data accession and storage.☆26Updated 2 weeks ago
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆14Updated 9 years ago