kuwisdelu / CardinalLinks
Mass spectrometry imaging toolbox
☆58Updated 6 months ago
Alternatives and similar repositories for Cardinal
Users that are interested in Cardinal are comparing it to the libraries listed below
Sorting:
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆39Updated 4 months ago
- Differential Expression Analysis tool box R lang package for omics data☆45Updated 3 weeks ago
- R package - MSstats☆83Updated this week
- R-based package for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass …☆29Updated this week
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆18Updated 2 weeks ago
- Methods for label-free mass spectrometry proteomics☆15Updated 3 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated last week
- ☆11Updated 3 years ago
- SCeptre is a python package that extends the functionalities of Scanpy to analyze multiplexed single-cell proteomics data.☆14Updated last year
- An S3 data object and framework for common quantitative proteomic analyses☆42Updated 2 weeks ago
- Central repository for the Multiplexed Tissue Imaging Workshop 2023.☆10Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆61Updated this week
- Tools for Batch Effects Diagnostics and Correction☆16Updated 2 months ago
- tidymass☆56Updated last month
- Report processing and protein quantification for MS-based proteomics☆46Updated last year
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 2 months ago
- R package for analysing proteomics data☆49Updated 2 years ago
- rMSI processing methods using C++☆11Updated 3 years ago
- The repo for LFQ-Analyst☆30Updated 10 months ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆24Updated last week
- This is a collection of minimal code to visualize various aspects of proteomics data.☆79Updated 3 years ago
- PhosR is a package for the comprehensive analysis of phosphoproteomic data.☆16Updated 7 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆58Updated 2 months ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆47Updated last month
- A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data☆13Updated 2 years ago
- Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.☆22Updated 3 years ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆93Updated 2 years ago
- Imputing proteomics data using deep learning models☆22Updated 3 weeks ago
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆12Updated last week
- Documentation is available here:☆17Updated this week