AlanRace / imzMLConverterLinks
Tool for converting mass spectrometry data to the imzML format.
☆15Updated 3 years ago
Alternatives and similar repositories for imzMLConverter
Users that are interested in imzMLConverter are comparing it to the libraries listed below
Sorting:
- Software for the analysis and interactive exploration of spectral imaging data☆31Updated 4 years ago
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆50Updated 3 weeks ago
- A parser to read .imzML files with python☆40Updated 8 months ago
- Community-contributed and experimental CellProfiler modules.☆67Updated last week
- File format for 96-well plate layouts.☆23Updated last year
- Predicting Cell Health with Morphological Profiles☆37Updated 3 years ago
- Mass spectrometry imaging toolbox☆59Updated 7 months ago
- Toolbox for the analysis of smFISH images.☆68Updated last year
- A Python library for reading and writing Flow Cytometry Standard (FCS) files☆48Updated 2 months ago
- Tool for precise, interactive, fast and scalable FISH spot detection☆49Updated 5 months ago
- CellProfiler tutorial pipelines and images☆93Updated 2 months ago
- Methods for Image-Based Cell Profiling☆51Updated last year
- Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.☆41Updated last month
- An Ilastik-like interactive pixel classifier.☆16Updated 10 months ago
- ☆21Updated last week
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.☆28Updated last month
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆70Updated 2 weeks ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- Python Flow Cytometry Calibration Library☆51Updated 2 months ago
- Workflow for LC-MS feature analysis and spatial mapping☆19Updated 7 years ago
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆32Updated 3 months ago
- Your Personal Assistant in Computational Bioimaging.☆42Updated 3 months ago
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆21Updated 3 years ago
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆28Updated 2 weeks ago
- Image classification for imaging flow cytometry.☆29Updated 6 months ago
- Python package for processing image-based profiling data☆120Updated this week
- Single-cell fluorescence microscopy data analysis☆26Updated 3 years ago
- Cell Painting and other pipelines from the Imaging Platform☆19Updated 5 months ago
- SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.☆38Updated 2 years ago