🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data
☆39Jun 10, 2024Updated 2 years ago
Alternatives and similar repositories for OmicLearn
Users that are interested in OmicLearn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆41Jun 3, 2026Updated 4 months ago
- An open-source Python package for accurate and sensitive peptide and protein quantification.☆22Oct 1, 2026Updated last month
- Spending less time on SDRF creates more time for amazing research☆10Oct 15, 2025Updated last year
- This is a collection of minimal code to visualize various aspects of proteomics data.☆87Jan 6, 2022Updated 4 years ago
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆90Nov 21, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Infrastructure of AlphaX ecosystem☆60Updated this week
- A modular, python-based framework for mass spectrometry. Powered by nbdev.☆193Apr 19, 2024Updated 2 years ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆98Jun 3, 2026Updated 4 months ago
- Realtime quality control for mass spectrometry data acquisition☆22May 19, 2026Updated 5 months ago
- modular & open DIA search☆119Updated this week
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆64Jul 15, 2026Updated 3 months ago
- Community-curated tutorials and datasets for ML in proteomics☆61Oct 31, 2025Updated last year
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆95Nov 17, 2025Updated 11 months ago
- A library for QC report based on MultiQC framework☆35Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Python library for analyzing mass spectrometry proteomics data.☆15Mar 20, 2024Updated 2 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆16Oct 23, 2026Updated last week
- MS/MS prediction for peptides☆25Dec 18, 2020Updated 5 years ago
- An LC-MS/MS glycan and glycopeptide search engine☆15Sep 15, 2025Updated last year
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 7 months ago
- Confidence control and FDR estimation for de novo peptide sequencing☆12Oct 23, 2026Updated last week
- Read/write functions to and from spatialdata for Deep Visual Proteomics☆22Oct 14, 2026Updated 2 weeks ago
- Python package for investigating the structural context of PTMs☆28Jan 9, 2025Updated last year
- ☆21Feb 14, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- Deep learning framework for proteomics☆161Aug 31, 2026Updated 2 months ago
- ☆10Mar 14, 2025Updated last year
- ☆11Oct 8, 2026Updated 3 weeks ago
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆43Updated this week
- EuBIC 2023 developer's meeting☆13Jan 16, 2023Updated 3 years ago
- Proteomics search & quantification so fast that it feels like magic☆317Oct 22, 2026Updated last week
- A list of tools on proteomics using deep learning☆111May 14, 2026Updated 5 months ago
- Instant Clue - Interactive Data Analysis☆21Oct 13, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Navigation links (and brief descriptions) to my repositories.☆14Nov 25, 2025Updated 11 months ago
- DL model to predict HLA peptide presentation☆17Jan 31, 2024Updated 2 years ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆21Oct 10, 2024Updated 2 years ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆39Oct 16, 2026Updated 2 weeks ago
- A cross-platform proteomics data analysis suite☆329Oct 24, 2026Updated last week
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆37Mar 5, 2026Updated 7 months ago
- GlyCombo, a combinatorial glycan composition assignment tool☆13May 4, 2026Updated 5 months ago