🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data
☆38Jun 10, 2024Updated 2 years ago
Alternatives and similar repositories for OmicLearn
Users that are interested in OmicLearn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆40Jun 3, 2026Updated 2 months ago
- An open-source Python package for accurate and sensitive peptide and protein quantification.☆21Aug 21, 2026Updated last week
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆94Nov 17, 2025Updated 9 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆62Jul 15, 2026Updated last month
- MS/MS prediction for peptides☆25Dec 18, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- modular & open DIA search☆113Updated this week
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆90Nov 21, 2025Updated 9 months ago
- Community-curated tutorials and datasets for ML in proteomics☆61Oct 31, 2025Updated 10 months ago
- A modular, python-based framework for mass spectrometry. Powered by nbdev.☆193Apr 19, 2024Updated 2 years ago
- ☆21Feb 14, 2025Updated last year
- Infrastructure of AlphaX ecosystem☆57Updated this week
- Python package for investigating the structural context of PTMs☆29Jan 9, 2025Updated last year
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆22Updated this week
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆37Mar 5, 2026Updated 5 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- EuBIC 2023 developer's meeting☆13Jan 16, 2023Updated 3 years ago
- GlyCombo, a combinatorial glycan composition assignment tool☆13May 4, 2026Updated 3 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆39Aug 25, 2026Updated last week
- Proteomics search & quantification so fast that it feels like magic☆301Jun 5, 2026Updated 2 months ago
- An LC-MS/MS glycan and glycopeptide search engine☆14Sep 15, 2025Updated 11 months ago
- Realtime quality control for mass spectrometry data acquisition☆22May 19, 2026Updated 3 months ago
- A cross-platform proteomics data analysis suite☆318Aug 7, 2026Updated 3 weeks ago
- ☆35Aug 26, 2026Updated last week
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆14Aug 20, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 5 months ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆15Jun 25, 2026Updated 2 months ago
- Search- and quantification-engine agnostic biological interpretation of proteomics data☆26Updated this week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Jul 16, 2026Updated last month
- Read/write functions to and from spatialdata for Deep Visual Proteomics☆20Aug 25, 2026Updated last week
- Python library for analyzing mass spectrometry proteomics data.☆15Mar 20, 2024Updated 2 years ago
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆22Apr 28, 2026Updated 4 months ago
- Package that facilitates pulling database entries from KEGG via its REST API☆14Aug 12, 2026Updated 3 weeks ago
- A list of tools on proteomics using deep learning☆110May 14, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Feb 4, 2025Updated last year
- ☆17Updated this week
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆132Mar 23, 2026Updated 5 months ago
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆17Jul 5, 2026Updated last month
- ☆15Aug 22, 2023Updated 3 years ago
- R tool to analyse and integrate multiple -omics data☆16Jan 4, 2026Updated 7 months ago
- ☆27Jun 5, 2025Updated last year