Alternatives and similar repositories for ProjectSVR

Users that are interested in ProjectSVR are comparing it to the libraries listed below

• JarningGau / GeneCooc
  ☆12Updated 9 months ago
• hedyBao / HNSCC_scRNA
  ☆38Updated last year
• chuiqin / irGSEA
  The integration of single cell rank-based gene set enrichment analysis
  ☆136Updated 3 months ago
• Sijin-ZhangLab / PanMyeloid
  ☆108Updated 5 years ago
• wu-yc / scMetabolism
  Quantifying metabolism activity at the single-cell resolution
  ☆144Updated 4 months ago
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆86Updated last year
• TangFei965 / pan-NK
  These are scripts for pan-cacner NK cells analyses.
  ☆72Updated 2 years ago
• Coolgenome / TCM
  Codes used in pan-T cell analysis
  ☆63Updated 2 years ago
• naomihabiblab / BEYOND_DLPFC
  Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease
  ☆61Updated 10 months ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆79Updated last year
• AweKevin / TIIClnc
  Machine learning-based identification of tumor-infiltrating immune cell-associated lncRNAs for improving outcomes and immunotherapy respo…
  ☆14Updated 3 years ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆52Updated 4 years ago
• ShellyCoder / cellcall
  inferring cell-cell communication from scRNA-seq of ligand-receptor
  ☆84Updated 2 years ago
• aliceygao / pan-Fibroblast
  ☆51Updated last year
• powellgenomicslab / Nebulosa
  R package to visualize gene expression data based on weighted kernel density estimation
  ☆107Updated last year
• youqiongye / CRC_scRNAseq
  ☆47Updated 3 years ago
• digitalcytometry / cytotrace2
  CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.
  ☆175Updated this week
• LocasaleLab / Single-Cell-Metabolic-Landscape
  Pipeline for exploring metebolic heterogeneity at single-cell resolution
  ☆74Updated 5 years ago
• tiroshlab / 3ca
  Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".
  ☆127Updated last year
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆68Updated 2 months ago
• Yelab2020 / Cottrazm
  Construct Tumor Transition Zone Microenvironment
  ☆49Updated 4 months ago
• Zaoqu-Liu / BioEnricher
  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer
  ☆81Updated last year
• carmonalab / GeneNMF
  Methods to discover gene programs on single-cell data
  ☆155Updated last month
• swaruplab / Single-nuclei-epigenomic-and-transcriptomic-landscape-in-Alzheimer-disease
  Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease
  ☆96Updated 4 years ago
• xlucpu / MOVICS
  Multi-Omics integration and VIsualization in Cancer Subtyping
  ☆145Updated 4 years ago
• califano-lab / PISCES
  R package for Protein activity analysis of single-cell RNAseq.
  ☆84Updated 2 years ago
• igrabski / sc-SHC
  Significance analysis for clustering single-cell RNA-sequencing data
  ☆119Updated last year
• Swarbricklab-code / BrCa_cell_atlas
  Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".
  ☆119Updated last year
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆110Updated 6 months ago
• BostonGene / MFP
  Mollecular Functional Portraits
  ☆43Updated last year