A package for reference mapping and nice visualization
☆24Dec 16, 2025Updated 4 months ago
Alternatives and similar repositories for ProjectSVR
Users that are interested in ProjectSVR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Mar 13, 2026Updated last month
- deMULTIplex2: robust sample demultiplexing for scRNA-seq☆19Mar 12, 2026Updated last month
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆18Jan 16, 2026Updated 3 months ago
- ☆38Apr 20, 2026Updated last week
- SCassist : An AI Based Workflow Assistant for Single-Cell Analysis☆31Aug 22, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆49Oct 29, 2025Updated 6 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Jul 5, 2023Updated 2 years ago
- Python package to perform normalization and variance-stabilization of single-cell data☆28Jul 17, 2025Updated 9 months ago
- single-cell Contamination Detection and Correction☆18Jan 15, 2025Updated last year
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆45Apr 23, 2026Updated last week
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆14Oct 7, 2024Updated last year
- Guided construction of single cell reference☆14Jul 3, 2023Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆22Nov 9, 2023Updated 2 years ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆641Mar 11, 2026Updated last month
- ☆15Aug 11, 2025Updated 8 months ago
- ☆35Apr 11, 2025Updated last year
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆962Updated this week
- Some NGS workflow created by snakemake☆14Jan 15, 2025Updated last year
- ☆17Sep 16, 2024Updated last year
- A Python-based tool for parallelized conversion of image datasets from various formats to OME-Zarr, with support for distributed processi…☆27Updated this week
- represent each cell in UMAP plots as a pie chart☆16Sep 27, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆21Apr 16, 2024Updated 2 years ago
- ☆61Feb 13, 2026Updated 2 months ago
- Methods for decontamination of single cell data☆62Feb 16, 2025Updated last year
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆35Jul 24, 2025Updated 9 months ago
- Sparse Tensor Programming in Python powered by Finch.jl☆22Updated this week
- useful functions for ggplot☆18Jul 16, 2025Updated 9 months ago
- Useful functions to make your scRNA-seq plot more cool!☆388Apr 18, 2026Updated last week
- Post hoc inference via multiple testing☆12Nov 2, 2025Updated 5 months ago
- R package for pathway analysis in scRNA-seq data☆79Aug 17, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆15Mar 23, 2024Updated 2 years ago
- LIANA: a LIgand-receptor ANalysis frAmework☆239Aug 7, 2024Updated last year
- ☆16Apr 11, 2022Updated 4 years ago
- 使用表达数据,对候选基因进行特征选择,然后构建诊断/预后模型,并使用SHAP分析特征的贡献策划的怒☆16Oct 16, 2025Updated 6 months ago
- Gene Expression Decomposition and Integration☆19Feb 9, 2026Updated 2 months ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 9 months ago
- deep learning-inspired explainable sequence model for transcription initiation☆103Mar 3, 2025Updated last year