A package for reference mapping and nice visualization
☆24Dec 16, 2025Updated 3 months ago
Alternatives and similar repositories for ProjectSVR
Users that are interested in ProjectSVR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Mar 13, 2026Updated 3 weeks ago
- deMULTIplex2: robust sample demultiplexing for scRNA-seq☆19Mar 12, 2026Updated 3 weeks ago
- A tool for identifying Phenotype-Associated cell Subpopulations from single-cell sequencing data by integrating bulk data☆18Jan 16, 2026Updated 2 months ago
- ☆37Feb 16, 2026Updated last month
- SCassist : An AI Based Workflow Assistant for Single-Cell Analysis☆31Aug 22, 2025Updated 7 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆49Oct 29, 2025Updated 5 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Jul 5, 2023Updated 2 years ago
- Python package to perform normalization and variance-stabilization of single-cell data☆28Jul 17, 2025Updated 8 months ago
- single-cell Contamination Detection and Correction☆17Jan 15, 2025Updated last year
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆45Mar 30, 2026Updated last week
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- R package for Cardiovascular Risk Dataset and Data generation script☆14Feb 1, 2019Updated 7 years ago
- We describe a transcriptional reference map of human natural killer (NK) cells based on analysis of scRNA-seq data from both blood and ti…☆14Oct 7, 2024Updated last year
- Guided construction of single cell reference☆12Jul 3, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- ☆22Nov 9, 2023Updated 2 years ago
- ☆33Apr 11, 2025Updated last year
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆631Mar 11, 2026Updated last month
- ☆15Aug 11, 2025Updated 7 months ago
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆940Updated this week
- Some NGS workflow created by snakemake☆14Jan 15, 2025Updated last year
- ☆17Sep 16, 2024Updated last year
- A Python-based tool for parallelized conversion of image datasets from various formats to OME-Zarr, with support for distributed processi…☆23Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- represent each cell in UMAP plots as a pie chart☆16Sep 27, 2021Updated 4 years ago
- ☆21Apr 16, 2024Updated last year
- ☆61Feb 13, 2026Updated last month
- Methods for decontamination of single cell data☆61Feb 16, 2025Updated last year
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆34Jul 24, 2025Updated 8 months ago
- Sparse Tensor Programming in Python powered by Finch.jl☆22Updated this week
- useful functions for ggplot☆18Jul 16, 2025Updated 8 months ago
- Useful functions to make your scRNA-seq plot more cool!☆384Mar 23, 2026Updated 2 weeks ago
- Post hoc inference via multiple testing☆12Nov 2, 2025Updated 5 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- R package for pathway analysis in scRNA-seq data☆79Aug 17, 2024Updated last year
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆13Mar 23, 2024Updated 2 years ago
- LIANA: a LIgand-receptor ANalysis frAmework☆238Aug 7, 2024Updated last year
- ☆16Apr 11, 2022Updated 4 years ago
- 使用表达数据，对候选基因进行特征选择，然后构建诊断/预后模型，并使用SHAP分析特征的贡献策划的怒☆16Oct 16, 2025Updated 5 months ago
- Gene Expression Decomposition and Integration☆19Feb 9, 2026Updated 2 months ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 9 months ago