aggreen / MTB-CNNLinks
CNN models for antibiotic resistance prediction in M. tuberculosis genomes. From Green & Yoon et al (forthcoming)
☆26Updated 2 years ago
Alternatives and similar repositories for MTB-CNN
Users that are interested in MTB-CNN are comparing it to the libraries listed below
Sorting:
- A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.☆41Updated this week
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆14Updated 7 months ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- ☆75Updated 11 months ago
- ☆77Updated 3 months ago
- SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence☆29Updated 10 months ago
- Integrated Machine Learning for Multi-omics Classification and Prediction☆25Updated last week
- Time-Course Multi-Omics data integration☆25Updated last year
- A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.☆47Updated last year
- Clinical interpretation of somatic mutations in cancer☆47Updated 7 months ago
- Scripts for analyses in the Griffin manuscript☆11Updated 2 years ago
- A continually expanding collection of RNA-seq tools☆51Updated 11 months ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 8 months ago
- BACNET is a Java based platform to develop website for multi-omics analysis☆13Updated 2 years ago
- ☆27Updated 2 years ago
- ☆36Updated 2 years ago
- Deep representation learning for disease prediction based on microbiome data☆60Updated 2 years ago
- ☆18Updated 2 years ago
- Microbial analysis in TCGA data☆91Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆32Updated last week
- Upload test☆22Updated last year
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated 2 years ago
- Gene Co-expression Network analysis pipeline☆25Updated 2 years ago
- a novel encoding method for viral identification in metagenomics☆15Updated 2 years ago
- step by step tutorial in the website☆25Updated 7 months ago
- pathway based data integration and visualization☆41Updated 5 months ago
- Deep neural networks for predicting CpG methylation☆37Updated 8 years ago
- Personal notes about work- and coding-related topics☆20Updated 2 years ago
- DNA methylation studies of mammalian species☆37Updated last month