This is a python package for genomics study with a GCN framework.
☆44Dec 12, 2024Updated last year
Alternatives and similar repositories for GCNFrame
Users that are interested in GCNFrame are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is the repository for DeepHost, a phage host prediction tool.☆22Dec 12, 2024Updated last year
- An accurate and efficient protein sequence design approach☆26Mar 16, 2025Updated last year
- MASIC generates selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in an LC-MS/MS analysis, characteri…☆18Dec 4, 2025Updated 7 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆26May 30, 2023Updated 3 years ago
- Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files☆13Jan 31, 2016Updated 10 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆13Jul 26, 2022Updated 3 years ago
- This is the repository for SeCNV, a single cell copy number profiling tool.☆12Dec 12, 2024Updated last year
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆15Jun 19, 2023Updated 3 years ago
- GCN with MNE input and preprocessing☆10Sep 27, 2020Updated 5 years ago
- ☆13Oct 8, 2021Updated 4 years ago
- Javascript package for embedding sequence logos☆19Jun 16, 2025Updated last year
- City University of Hong Kong 2022/23 Semester B CS5489 Machine Learning: Algorithms and Applications☆20May 20, 2023Updated 3 years ago
- Sample Metadata Curation for curatedMetagenomicData☆32Updated this week
- Microbiome profiling☆15Nov 20, 2025Updated 8 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Upload test☆23Jan 1, 2024Updated 2 years ago
- Pipeline to call somatic cancer neoantigens from mutations in patient tumor DNA☆14Feb 16, 2023Updated 3 years ago
- Bloocoo is a k-mer spectrum-based read error corrector, designed to correct large datasets with a very low memory footprint.☆12May 22, 2017Updated 9 years ago
- Scripts that used in our chicken T2T manuscript.☆22Jan 14, 2026Updated 6 months ago
- ☆22Jan 14, 2024Updated 2 years ago
- detect temperate phage (active prophage) in assembled bacterial genome sequences☆15Feb 10, 2022Updated 4 years ago
- ☆15Apr 1, 2024Updated 2 years ago
- EEG & MRI processing, Micro-States analysis & Sources localization☆25Jan 12, 2026Updated 6 months ago
- A guide to running MaxQuant in Linux☆36Feb 10, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is a new deep-learning pipeline for AMP predictions☆17Apr 18, 2026Updated 3 months ago
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆106May 23, 2025Updated last year
- Versatile FASTA/FASTQ demultiplexer.☆33Jun 10, 2026Updated last month
- A tool to assemble high-quality phages from metagenomes.☆19May 22, 2026Updated 2 months ago
- code for box-covering algorithms☆20Sep 30, 2021Updated 4 years ago
- ECML16: GaKCo: a Fast Gapped k-mer string Kernel using Counting☆14Aug 28, 2019Updated 6 years ago
- Julia package for visualising genomic data☆16Jan 11, 2024Updated 2 years ago
- map Illumina metagenomes to genomes!☆39Jan 22, 2026Updated 6 months ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆36Aug 18, 2025Updated 11 months ago
- DNN-based small variant caller☆12May 2, 2022Updated 4 years ago
- GenBank taxonomy processing tools☆15Jun 30, 2018Updated 8 years ago
- ☆13Oct 3, 2017Updated 8 years ago
- Burrows-Wheeler Aligner for x86,x86_64, arm and aarch64 architectures (PC, Raspberry PI, ODROID, M1)☆10Apr 13, 2022Updated 4 years ago
- ☆49Sep 17, 2024Updated last year
- CasSeqGCN: Combining Network Structure and Temporal Sequence to Predict Information Cascades☆16Nov 21, 2021Updated 4 years ago