Alternatives and similar repositories for GCNFrame:

Users that are interested in GCNFrame are comparing it to the libraries listed below

• biocore / tcga
  Microbial analysis in TCGA data
  ☆90Updated last year
• BackofenLab / RNAProt
  Modelling RBP binding preferences to predict RPB binding sites
  ☆11Updated last year
• bgudenas / DeepLncRNA
  ☆11Updated 5 years ago
• mhorlacher / rbpnet
  ☆18Updated last year
• FunctionLab / sei-framework
  code to run sei and obtain sei and sequence class predictions
  ☆99Updated 2 years ago
• zhangwei2015 / IMonitor
  This script use to analyze the immune repertoire sequenced by high throughtput sequencing
  ☆24Updated 3 years ago
• aggreen / MTB-CNN
  CNN models for antibiotic resistance prediction in M. tuberculosis genomes. From Green & Yoon et al (forthcoming)
  ☆23Updated 2 years ago
• xryanglab / RiboMiner
  a toolset for mining multi-dimensional features of the translatome with ribosome profiling data
  ☆17Updated 2 months ago
• cyang235 / LncADeep
  LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning
  ☆27Updated 6 years ago
• canceromics / MeRIPseqPipe
  MeRIPseqPipe：An integrated analysis pipeline for MeRIP-seq data based on Nextflow.
  ☆38Updated 10 months ago
• tomazc / iCount
  iCount, protein-RNA interaction analytics
  ☆23Updated 3 years ago
• UK-SBCoA-EbbertLab / brain_cDNA_discovery
  ☆12Updated 2 months ago
• tsailabSJ / guideseq
  Analysis pipeline for the GUIDE-seq assay.
  ☆24Updated last month
• skrakau / PureCLIP
  Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data
  ☆29Updated 3 years ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆35Updated 2 years ago
• erinhwilson / promoter-id-from-rnaseq
  Computational framework to identify promoter sequences from RNA-seq datasets
  ☆10Updated last year
• RTH-tools / crispron
  CRISPR Cas9 ontarget prediction software
  ☆26Updated 3 weeks ago
• CraigIDent / SpliSER
  Bioinformatic tool for Splice site Strength Estimation using RNA-seq
  ☆15Updated 2 years ago
• YeoLab / eCLIP
  ☆37Updated 2 years ago
• JiaqiLiZju / Nvwa
  ☆34Updated 2 years ago
• vagarwal87 / TargetScanTools
  A suite of tools for evolutionary and functional analysis of microRNA binding sites http://www.targetscan.org
  ☆40Updated 6 years ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆41Updated 10 months ago
• stat-lab / EvalSVcallers
  Evaluate the performances (precision and recall) of structural variation (SV) callers
  ☆34Updated 5 months ago
• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆24Updated 11 months ago
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆64Updated 5 months ago
• GoekeLab / proActiv
  Estimation of Promoter Activity from RNA-Seq data
  ☆51Updated 3 years ago
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆69Updated 3 years ago
• AAlhendi1707 / countToFPKM
  Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
  ☆62Updated 3 years ago
• XSLiuLab / Seq2Neo
  Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction
  ☆21Updated 2 years ago
• JanZrimec / DeepExpression
  ☆33Updated 2 years ago