Alternatives and similar repositories for HEELS

Users that are interested in HEELS are comparing it to the libraries listed below

• GP2code / GP2-Multiancestry-metaGWAS
  ☆12Updated 2 years ago
• ipdgc / Manhattan-Plotter
  This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3
  ☆13Updated 6 years ago
• liusihan / population-compare-pipeline
  Analysis pipelines for QTL discovery and GWAS signals interpretation
  ☆12Updated last year
• FinucaneLab / fine-mapping-inf
  Fine-mapping with infinitesimal effects
  ☆20Updated 5 months ago
• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆20Updated 3 months ago
• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆30Updated last year
• yuanzhongshang / GIFT
  ☆20Updated last year
• lcpilling / gwasRtools
  R package for processing of GWAS output
  ☆16Updated last year
• derekmichaelwright / gwaspr
  An R package for plotting GWAS results from the GAPIT package
  ☆14Updated last month
• EMO-Consortium / GeneticCorrelation
  ☆12Updated last year
• roman-tremmel / ggfastman
  Fast manhattenplots using ggplot2
  ☆13Updated last year
• Kyoko-wtnb / mvGWAMA
  Python script for multivariate GWAS meta-analysis
  ☆24Updated 11 months ago
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated 3 weeks ago
• hakyimlab / PredictDB_Pipeline_GTEx_v7
  PredictDB Pipeline for GTEx v7 data
  ☆16Updated 3 years ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆16Updated 4 years ago
• comorment / containers
  CoMorMent-Containers
  ☆33Updated 2 months ago
• hakyimlab / phenomexcan
  PhenomeXcan: mapping the genome to the phenome through the transcriptome
  ☆11Updated 5 years ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆30Updated last week
• immunogenomics / cov-ldsc
  ☆11Updated 3 years ago
• swvanderlaan / MetaGWASToolKit
  A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies
  ☆16Updated 3 weeks ago
• hakha-most / gwas_eqtl
  ☆18Updated 2 years ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆32Updated last year
• bhattacharya-a-bt / isotwas
  ☆23Updated 3 months ago
• koido / MENTR
  ☆13Updated 2 months ago
• atgu / GWASpy
  GWAS QC, PCA, haplotype phasing, genotype imputation
  ☆18Updated 3 months ago
• SUwonglab / rss-net
  RSS-NET: Regression with Summary Statistics exploiting Network Topology
  ☆19Updated 6 months ago
• MRCIEU / gwasglue2
  Connecting GWAS summary data to analytical tools
  ☆22Updated last year
• omerwe / S-PCGC
  Heritability, genetic correlation and functional enrichment estimation for case-control studies
  ☆19Updated last year
• marcoralab / MRcovid
  ☆13Updated 3 years ago