Virus discovery
☆18Sep 1, 2026Updated 2 weeks ago
Alternatives and similar repositories for dark-matter
Users that are interested in dark-matter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 11 years ago
- Galaxy tools and wrappers for sequence analysis☆17Jun 11, 2024Updated 2 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Apr 2, 2021Updated 5 years ago
- ☆23Aug 5, 2026Updated last month
- Tools for visualizing and comparing data from vertebrate retinas☆14Jan 20, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Influenza genome analysis Nextflow workflow☆33Sep 15, 2025Updated last year
- R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecula…☆11Feb 19, 2026Updated 7 months ago
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Sep 6, 2013Updated 13 years ago
- Lecture on viral phylodynamics☆11Oct 28, 2021Updated 4 years ago
- Python code to generate BEAST2 XML files☆23May 6, 2026Updated 4 months ago
- A reference viral database (RVDB)☆27Nov 30, 2018Updated 7 years ago
- My attempt at participating in some mutant form of Tidy Tuesday.☆12Dec 9, 2019Updated 6 years ago
- https://twitter.com/christinezhang/status/1015204671265308673☆12Jul 6, 2018Updated 8 years ago
- Code for Informatics nano course☆11Jan 20, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- University of Cincinnati ggplot2 workshop☆10Apr 16, 2019Updated 7 years ago
- Tutorial for visualising admixture on a map☆25Jan 4, 2021Updated 5 years ago
- R package to run BEAST2☆11Dec 8, 2025Updated 9 months ago
- Multivariate vIsualisatioN and OuTlier Analysis Using R☆14Apr 8, 2023Updated 3 years ago
- Programmatically interact with the GISAID database.☆83Aug 5, 2025Updated last year
- Finding prophage regions in bacterial genomes using brute force☆22Jan 20, 2023Updated 3 years ago
- Applied Quantitative Methods course at the College of Charleston☆21Apr 2, 2026Updated 5 months ago
- Pyro models of SARS-CoV-2 variants☆80Jul 26, 2024Updated 2 years ago
- Virus reassortment inference software. Infers both recent and ancestral reassortment and uses flexible molecular clock constraints.☆23Sep 29, 2025Updated 11 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Provid…☆14Jun 26, 2019Updated 7 years ago
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆22Aug 6, 2026Updated last month
- Inference framework for serological data☆20Updated this week
- Report Writing for Data Science in R☆10Apr 17, 2019Updated 7 years ago
- Solutions for exercises in Master the Tidyverse☆16Dec 11, 2017Updated 8 years ago
- BEAST analysis backing effective linguistics☆12Jul 6, 2026Updated 2 months ago
- profile the repeat landscape in a genome☆16Sep 9, 2014Updated 12 years ago
- A pipeline for scaffolding a genome assembly using Hi-C☆13Nov 24, 2022Updated 3 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆44Sep 7, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Alignment editor for Mac OS X☆30Aug 1, 2017Updated 9 years ago
- Ebola virus surveillance☆15Aug 28, 2016Updated 10 years ago
- A Tutorial Introduction to R☆16Sep 6, 2023Updated 3 years ago
- Find Best SLURM Partition to Run a Job☆14Oct 20, 2023Updated 2 years ago
- A python library for accessing 2bit files☆21Apr 21, 2026Updated 5 months ago
- ☆10Nov 18, 2022Updated 3 years ago
- Ion Torrent SDK Docs☆10Dec 26, 2022Updated 3 years ago