TheJacksonLaboratory / zarrdatasetLinks
A dataset for loading zarr files to be used in machine learning training pipelines
☆34Updated 7 months ago
Alternatives and similar repositories for zarrdataset
Users that are interested in zarrdataset are comparing it to the libraries listed below
Sorting:
- A minimal Zarr image viewer based on Viv.☆175Updated last month
- scalable multiscale image pyramids in python☆29Updated last year
- ☆14Updated last year
- A CodecPipeline for zarr-python backed by the zarrs Rust crate☆58Updated last week
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆54Updated last month
- Not HDF5☆193Updated 2 weeks ago
- ☆42Updated last year
- Discover, install, and share napari plugins☆54Updated 2 weeks ago
- Distributed image processing☆225Updated 3 weeks ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆87Updated 2 weeks ago
- Python based viewer for large mulit-dimensional datasets.☆20Updated 5 years ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆47Updated last week
- Pydantic models for OME-NGFF☆24Updated 3 months ago
- A 3D interactivity toolbox for napari☆37Updated 5 months ago
- The RPC library used in ImJoy.☆25Updated last year
- ☆20Updated last month
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆63Updated 3 weeks ago
- A library to facilitate machine learning on multi-dimensional images.☆87Updated 2 weeks ago
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆20Updated last year
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- Create web-based OME-Zarr galleries☆22Updated last month
- Zarr filesystem backend for N5☆17Updated 2 weeks ago
- A multi-dimensional spatial image data structure for scientific Python.☆43Updated 4 months ago
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆103Updated 3 months ago
- Reading HDF5 files with Zarr☆11Updated 4 years ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆36Updated last week
- Streaming directly to Zarr on the file system or S3☆24Updated 3 weeks ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆148Updated last week