YunxiaoRen / ML-iAMRLinks
☆34Updated 2 years ago
Alternatives and similar repositories for ML-iAMR
Users that are interested in ML-iAMR are comparing it to the libraries listed below
Sorting:
- Various bioinformatics tutorials☆61Updated last year
- Snakemake workflow for metagenomic classification with Kraken2☆65Updated 2 years ago
- ☆52Updated last year
- ☆26Updated 10 months ago
- gutSMASH☆55Updated 6 months ago
- DeepMicrobes: taxonomic classification for metagenomics with deep learning☆95Updated 2 years ago
- A list of awesome awesomeness related to bioinformatics and associated fields☆41Updated 3 months ago
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆51Updated this week
- This repository hosts a large collection of Nextflow snippets☆57Updated 5 months ago
- Analyses in R and Python Using curatedMetagenomicData☆32Updated 3 months ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆112Updated last year
- Code for design of diagnostic PCR primers, and metabarcoding markers.☆62Updated last year
- Fast and flexible ORF finder☆73Updated 3 years ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆59Updated 11 months ago
- MGnify genome analysis pipeline☆108Updated this week
- Bioinformatics tool for Locus Visualisation☆111Updated 2 months ago
- A general metagenomics data mining system focus on robust microbiome research☆57Updated 10 months ago
- ☆73Updated 9 months ago
- Bioinformatics Tools☆87Updated 2 weeks ago
- List of genome assembly tools☆70Updated 2 weeks ago
- [WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.☆20Updated this week
- Get, parse, and extract information from the SRA metadata files☆42Updated 2 years ago
- ☆56Updated last year
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆119Updated last year
- visual analysis of your VCF files☆34Updated 2 years ago
- ☆42Updated 3 weeks ago
- A simple RNA-Seq differential gene expression pipeline using Nextflow☆101Updated last week
- What should perfect bioinformatic tools be like?☆128Updated 2 months ago
- Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber☆61Updated 10 months ago
- A command line tool to identify and annotate small proteins in microbial sequencing datasets.☆24Updated 2 years ago