Alternatives and similar repositories for getSequenceInfo

Users that are interested in getSequenceInfo are comparing it to the libraries listed below

• PacificBiosciences / pbipa
  Improved Phased Assembler
  ☆28Updated 3 years ago
• JLSteenwyk / orthofisher
  a broadly applicable tool for automated gene identification and retrieval
  ☆32Updated 10 months ago
• HKU-BAL / MegaPath-Nano
  MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…
  ☆14Updated 3 years ago
• at-cg / mm2-plus
  Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)
  ☆35Updated 4 months ago
• agshumate / LiftoffTools
  ☆28Updated 2 years ago
• MrTomRod / orthofinder-tools
  Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …
  ☆19Updated last year
• HaploKit / vechat
  Correcting errors in noisy long reads using variation graphs
  ☆50Updated 2 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆30Updated this week
• RolandFaure / Hairsplitter
  Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.
  ☆35Updated 6 months ago
• TravisWheelerLab / BATH
  Better Alignments with Translated HMMER
  ☆23Updated 2 weeks ago
• almeidasilvaf / syntenet
  An R package to infer and analyze synteny networks from protein sequences
  ☆33Updated 3 months ago
• rnajena / poseidon
  PoSeiDon: positive selection detection and recombination analysis pipeline
  ☆38Updated last month
• uio-cels / NucDiff
  In-depth characterization and annotation of differences between two sets of DNA sequences
  ☆63Updated 5 years ago
• DessimozLab / OMAnnotator
  Consensus genome annotation using OMA
  ☆27Updated 4 months ago
• broadinstitute / GATK-for-Microbes
  ☆29Updated 4 years ago
• mikolmogorov / maf2synteny
  A tool for recovering synteny blocks from multiple alignment
  ☆31Updated 4 years ago
• salzberg-lab / PSAURON
  PSAURON is a machine learning model for rapid assessment of protein coding gene annotation
  ☆41Updated last month
• sanger-tol / genomeassembly
  Implementation of ToL genome assembly workflows
  ☆23Updated last week
• rhysf / Diamond2GO
  Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functiona…
  ☆23Updated 2 months ago
• Gaius-Augustus / GUSHR
  Generating UTRs from SHort Reads
  ☆12Updated 5 years ago
• SouthGreenPlatform / culebrONT
  A snakemake pipeline to assembly, polishing, correction and quality check from Oxford nanopore reads.
  ☆36Updated 6 months ago
• at-cg / RAFT
  ☆28Updated last year
• Sanrrone / GGisy
  Genome-Genome circle synteny
  ☆25Updated last year
• DessimozLab / omamer
  OMAmer - tree-driven and alignment-free protein assignment to sub-families
  ☆22Updated last week
• DessimozLab / edgehog
  Infering ancestral synteny with hierarchical orthologous groups
  ☆33Updated last week
• guigolab / geneidx
  Nextflow pipeline for genome annotation of protein-coding genes
  ☆16Updated last year
• reubwn / collinearity
  scripts to parse and analyse MCScanX collinearity output
  ☆32Updated 5 years ago
• nextgenusfs / redmask
  Genome assembly soft-masking using Red (REpeat Detector)
  ☆18Updated 6 years ago
• tlemane / kmdiff
  Differential k-mer analysis
  ☆37Updated last year
• mbhall88 / lrge
  Genome size estimation from long read overlaps
  ☆62Updated last month