BiomedSciAI / Geno4SDLinks
An python omics data toolkit for the analysis across biological scales
☆11Updated last year
Alternatives and similar repositories for Geno4SD
Users that are interested in Geno4SD are comparing it to the libraries listed below
Sorting:
- Cancer Suppressor Gene and Oncogene Prediction using Deep Learning (CNN)☆10Updated 7 years ago
- ☆18Updated 2 months ago
- Python package for analyzing and visualizing iModulons☆14Updated last week
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- A curated list of awesome resources, papers, datasets, and tools related to Genomic LLMs. This repository aims to provide a comprehensive…☆16Updated last year
- CLUMPS adapted to post-translational modifications.☆10Updated 5 months ago
- BioLearns: Computational Biology and Bioinformatics Toolbox in Python☆12Updated 3 years ago
- R tool to analyse and integrate multiple -omics data☆15Updated 5 months ago
- ☆27Updated 7 months ago
- IntelliGenes: AI/ML pipeline for predictive analyses using multi-genomic profiles.☆17Updated last year
- Comprehensive Python client for the Uniprot REST API☆52Updated last month
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆21Updated 4 years ago
- This page hosts NeKo, a python package that allow the user to automatically build gene regulatory networks from any databases.☆16Updated last month
- ☆22Updated this week
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆36Updated 7 months ago
- analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…☆11Updated 4 years ago
- ☆10Updated 4 years ago
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆38Updated last year
- A collection of useful functions for bioinformatics data analysis☆24Updated 4 months ago
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- GO2Sum is a deep learning based summarizer that generates human-readable summaries for GO term annotations made by protein function predi…☆16Updated last year
- Antibody-Specific Epitope Mapping☆14Updated 2 months ago
- Shiny app to easily create publishable plots for scientific papers☆39Updated 3 months ago
- Automated Explainable AI for Omics☆30Updated this week
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆14Updated 4 years ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- ☆19Updated 5 years ago
- Examples for gget (https://github.com/pachterlab/gget).☆38Updated 2 months ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆41Updated 8 months ago
- Python toolbox for multi-omics data mapping and analysis☆26Updated 2 years ago