mikeblazanin / gcplyrLinks
gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data
☆35Updated 4 months ago
Alternatives and similar repositories for gcplyr
Users that are interested in gcplyr are comparing it to the libraries listed below
Sorting:
- Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…☆47Updated 3 years ago
- Analysis of Phylogenetics and Evolution☆69Updated last month
- Species richness with high diversity☆68Updated 3 months ago
- diversity estimation under ecological networks☆84Updated 3 months ago
- This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions f…☆68Updated last year
- A Toolbox for Manipulating Biological Sequences in R☆22Updated 2 years ago
- Simple R utilities for working with HMMER☆20Updated 9 months ago
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆56Updated 11 months ago
- User-Friendly R Package for Supervised Machine Learning Pipelines☆58Updated 4 months ago
- Microbial community analysis tools in R☆22Updated 2 years ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Updated 5 years ago
- An Amazing Shiny App☆17Updated 3 years ago
- Count Regression for Correlated Observations with the Beta-binomial☆106Updated 3 months ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆94Updated 2 weeks ago
- accessory functions for processing microbial community data☆12Updated 2 years ago
- Miscellaneous functions for metagenomic analysis.☆50Updated last month
- colorblind friendly color palettes and ggplot2 graphic system extensions for publication-quality scientific figures☆118Updated 7 months ago
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- A synthesis of bacterial and archaeal phenotypic trait data☆35Updated last year
- R package MiscMetabar: Miscellaneous functions for metabarcoding analysis☆18Updated last month
- ☆19Updated last year
- Pairwise multilevel comparison using adonis☆77Updated 2 years ago
- An interactive web application for demonstrating and using phyloseq.☆60Updated 5 years ago
- Creating plasmid maps inside ggplot.☆87Updated 7 months ago
- Base Classes and Functions for Phylogenetic Tree Input and Output☆103Updated 3 months ago
- A comprehensive and customizable R package for microbiome analysis.☆23Updated last month
- power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA☆38Updated 9 years ago
- Source files for online resources of Bioinformatics of Infectious Diseases course☆22Updated 5 years ago
- An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)☆19Updated last week
- babette is an R package to work with BEAST2☆46Updated last month