ProteinQure / cbh21-protein-solubility-challengeLinks
Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinformatics Hackathon 2021.
☆22Updated 4 years ago
Alternatives and similar repositories for cbh21-protein-solubility-challenge
Users that are interested in cbh21-protein-solubility-challenge are comparing it to the libraries listed below
Sorting:
- An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs☆11Updated last year
- ☆18Updated last year
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Updated 3 years ago
- ViennaRNA Package consists of a C code library for the prediction and comparison of RNA secondary structures☆14Updated 3 years ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆30Updated 3 weeks ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Updated 6 years ago
- Benchmarking Pipeline for Prediction of Protein-Protein Interactions☆13Updated 3 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆30Updated last year
- deep protein solubility prediction☆39Updated 6 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆40Updated 6 months ago
- Deep learning protein-protein binding sites prediction☆20Updated 2 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆33Updated 2 weeks ago
- ☆39Updated 4 years ago
- Code for LazyAF pipeline☆20Updated last year
- ☆26Updated 5 years ago
- a collection of colabs useful for molecular biology☆31Updated last year
- ☆44Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- ☆41Updated last week
- ☆17Updated last week
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 4 years ago
- Python package and command line tool for epitope prediction☆52Updated last year
- Convert PDB residues to their Uniprot equivalents☆17Updated 5 years ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆18Updated 2 months ago
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21Updated 3 years ago
- A Python platform for Structural Bioinformatics☆57Updated 6 months ago
- ☆13Updated 5 years ago
- Long disorder consensus predictor☆17Updated 2 weeks ago