ProteinQure / cbh21-protein-solubility-challenge
Template with code & dataset for the "Structural basis for solubility in protein expression systems" challenge at the Copenhagen Bioinformatics Hackathon 2021.
☆21Updated 3 years ago
Alternatives and similar repositories for cbh21-protein-solubility-challenge:
Users that are interested in cbh21-protein-solubility-challenge are comparing it to the libraries listed below
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs☆11Updated 7 months ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Updated 3 years ago
- Next generation sequence parameter library for proteins☆26Updated last month
- ☆17Updated 2 months ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆18Updated 2 months ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆16Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 3 years ago
- Convert PDB residues to their Uniprot equivalents☆16Updated 4 years ago
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆29Updated 8 months ago
- Package for processing and analyzing glycans and their role in biology.☆58Updated this week
- ☆24Updated 3 years ago
- ☆30Updated 4 years ago
- ☆23Updated last year
- ☆28Updated 9 months ago
- ☆34Updated 4 months ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated last year
- Python wrapper to design RNA molecules using RNAblueprint, RNARedPrint and for energy evaluations ViennaRNA, Hotknots, pKiss and Nupack.☆20Updated 6 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ViennaRNA Package consists of a C code library for the prediction and comparison of RNA secondary structures☆14Updated 2 years ago
- Python package for analysis of antibody heavy and light chains☆25Updated 4 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆65Updated 2 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆37Updated 3 weeks ago
- The Complete Python Antibody Library☆21Updated 6 months ago
- ☆16Updated 8 months ago
- Benchmarking Pipeline for Prediction of Protein-Protein Interactions☆11Updated 3 years ago
- Fast, sensitive and accurate protein remote homology search on GPUs☆15Updated 9 months ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆44Updated 6 months ago