WeiliWw / VirHostMatcher-Net
VirHostMatcher-Net: A network-based computational tool for predicting virus-host interactions.
☆19Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for VirHostMatcher-Net
- Downstream processing of VAMB binning for Viral Elucidation☆46Updated 4 months ago
- Predict prokaryotic host for phage metagenomic sequences☆52Updated last month
- VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison☆28Updated 6 years ago
- Phage-Host Interaction Search Tool☆27Updated 4 months ago
- Prophage Activity Estimator☆26Updated 5 months ago
- Taxonomic classification of viruses at Order and Family level☆18Updated last year
- ☆35Updated 11 months ago
- ☆48Updated 8 months ago
- ☆30Updated 10 months ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆29Updated 2 years ago
- HOTSPOT is a hierarchical host prediction tool for plasmid contigs using Transformer.☆9Updated 6 months ago
- Phage prediction tools☆15Updated last year
- ☆27Updated 2 weeks ago
- ☆24Updated last month
- This program is designed for annotation of antimicrobal resistance(AMR), transposon(Tn) and integron(In) in bacteria.☆19Updated last year
- ☆37Updated 8 months ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆36Updated 3 weeks ago
- Comparisons of multiple different prophage predictions☆24Updated 2 years ago
- Predicting plasmid contigs from assemblies using single copy marker genes, plasmid genes, kmers - Developed by Linda van der Graaf☆48Updated 6 months ago
- ☆45Updated 6 months ago
- ☆23Updated 8 months ago
- ☆23Updated 6 months ago
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆24Updated last month
- ☆17Updated 2 months ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆21Updated last year
- ☆16Updated 3 years ago
- An algorithm for clustering metagenomic sequences.☆30Updated 9 months ago
- ☆18Updated 2 years ago
- This repository contains scripts used in the manuscript "Massive expansion of human gut bacteriophage diversity"☆19Updated 3 years ago
- A python library for predicting phage lifestyle based on genome sequence☆35Updated last year