sxh1136 / Phage_tools
Phage prediction tools
☆15Updated last year
Alternatives and similar repositories for Phage_tools:
Users that are interested in Phage_tools are comparing it to the libraries listed below
- EzAAI - High Throughput Prokaryotic AAI Calculator☆37Updated 3 months ago
- Predicting plasmid contigs from assemblies using single copy marker genes, plasmid genes, kmers - Developed by Linda van der Graaf☆48Updated 9 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆47Updated 6 months ago
- Jaeger is a quick and precise tool for detecting phages in sequence assemblies.☆25Updated 2 months ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆31Updated last year
- A tool for removing redundant genomes from a set of assemblies☆70Updated last year
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆53Updated 3 weeks ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆31Updated 2 years ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆56Updated this week
- A workflow and scripts for large-scale antiSMASH analyses☆33Updated 3 weeks ago
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing