WCSCourses / SARS-COV-2_B4BLinks
This is a repository for development of the SARS-CoV-2 Bioinformatics for Beginners Course
☆11Updated 11 months ago
Alternatives and similar repositories for SARS-COV-2_B4B
Users that are interested in SARS-COV-2_B4B are comparing it to the libraries listed below
Sorting:
- This repo collects the list of podcasts related to microbiome science: science, microbiology and bioinformatics.☆29Updated 7 months ago
- This repo collects the list of learning online resources related to microbiome computational science and tools.☆92Updated 7 months ago
- Bioinformatics Tools☆87Updated this week
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆51Updated last month
- Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline☆40Updated last year
- snipit: summarise snps relative to your reference sequence☆161Updated last month
- Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.☆47Updated 2 months ago
- ☆52Updated last year
- This repo collects the list of conferences/meetings/workshops etc. related to microbiome science and tools.☆62Updated 2 months ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆32Updated 2 years ago
- Assembly and intrahost/low-frequency variant calling for viral samples☆137Updated 3 weeks ago
- A user-friendly workflow for phylogenomics☆213Updated 2 weeks ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 2 weeks ago
- Course material for the metagenomics course☆44Updated 3 years ago
- ☆137Updated last year
- Nextflow pipeline to analyze PacBio HiFi full-length 16S data☆77Updated 4 months ago
- Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data☆154Updated last week
- Metagenomic classification of long-read sequencing data☆85Updated last month
- Programmatically interact with the GISAID database.☆76Updated 2 months ago
- ☆211Updated 5 months ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆119Updated last year
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆116Updated 3 months ago
- Making whole bacterial genome sequencing data analysis easy☆107Updated 2 months ago
- A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.☆121Updated last year
- Metatranscriptomics Tutorial☆62Updated last year
- Workflow for SARS-CoV-2 genome Assembly at FioCruz/IAM☆29Updated last year
- Python introduction for life scientists☆46Updated last month
- What should perfect bioinformatic tools be like?☆127Updated last month
- Bioinformatics tool for Locus Visualisation☆106Updated last month
- Resources for bioinformatics jobs☆51Updated last year