SvetlanaUP / Microbiome-etc-Podcasts
This repo collects the list of podcasts related to microbiome science: science, microbiology and bioinformatics.
☆29Updated 5 months ago
Alternatives and similar repositories for Microbiome-etc-Podcasts
Users that are interested in Microbiome-etc-Podcasts are comparing it to the libraries listed below
Sorting:
- This repo collects the list of conferences/meetings/workshops etc. related to microbiome science and tools.☆61Updated last month
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆30Updated 2 years ago
- Nextflow pipeline to analyze PacBio HiFi full-length 16S data☆76Updated 2 months ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆73Updated 2 years ago
- 🍄 Qiime2 ITS classifiers for the UNITE database☆37Updated last month
- Using ggtree to build phylogenetic trees☆47Updated 6 months ago
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆71Updated 2 years ago
- MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.☆88Updated 9 months ago
- Compare different differential abundance and expression methods☆51Updated 3 years ago
- ARG normalization by mapping to the ARO ontology.☆57Updated 3 weeks ago
- Bash pipeline for analysis of ONT full-length 16S sequences in QIIME2☆29Updated 5 years ago
- An R package designed for drawing gene arrow maps☆77Updated 3 weeks ago
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆65Updated last year
- Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.☆45Updated last month
- Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWoo…☆54Updated 3 years ago
- Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project☆11Updated 2 years ago
- Bayesian inference of ancestral dates on bacterial phylogenetic trees☆88Updated last month
- Bioinformatics Tools☆87Updated this week
- (Meta-)genome screening for functional and natural product gene sequences☆87Updated last week
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆66Updated 2 weeks ago
- ☆55Updated this week
- Fantaxtic - Nested Bar Plots for Phyloseq Data☆30Updated 10 months ago
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆53Updated 4 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆59Updated 2 weeks ago
- Metatranscriptomics Tutorial☆62Updated last year
- Recovery of prokaryotic genomes from shotgun metagenomic sequencing data☆60Updated 4 years ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆116Updated last year
- BEAV: Bacterial Element Annotation reVamped☆65Updated 6 months ago
- ☆70Updated 2 weeks ago
- Metagenomics-related extended functionalities to samtools☆21Updated last year