☆17Dec 7, 2022Updated 3 years ago
Alternatives and similar repositories for sequence_braiding
Users that are interested in sequence_braiding are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Minipoa: A minimizer-based method for fast and memory-efficient partial order alignment☆19May 23, 2026Updated 4 months ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 6 months ago
- Write-once-read-many table for large datasets.☆27Oct 5, 2023Updated 2 years ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆27Oct 28, 2021Updated 4 years ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- find likely coding segments in DNA using composition-normalised hexamer tables☆18Oct 18, 2024Updated last year
- ☆17Apr 6, 2023Updated 3 years ago
- The website for bioboxes☆11Jun 9, 2017Updated 9 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆32Jul 3, 2026Updated 2 months ago
- Modified or extracted from other programs☆15Dec 14, 2011Updated 14 years ago
- Modular Multi-scale Integrated Genome Graph Browser☆100Jul 23, 2026Updated last month
- Generate random test data for bioinformatics☆27Jun 17, 2024Updated 2 years ago
- Tools for indexing gzip files to support random-like access.☆28Mar 15, 2021Updated 5 years ago
- A k-mer search engine for all Sequence Read Archive public accessions☆46May 13, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆19Nov 8, 2022Updated 3 years ago
- Implicit Interval Tree with Interpolation Index☆43Jul 13, 2022Updated 4 years ago
- Efficient construction of the BWT using string compression☆24May 26, 2026Updated 3 months ago
- Monster Lab: teaching the science of sequencing with Lego☆16Sep 14, 2018Updated 8 years ago
- VEP Plugin to annotate high-impact five prime UTR variants☆30Aug 23, 2024Updated 2 years ago
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- Experimental features for Nextflow☆54Sep 11, 2026Updated last week
- Code to dump out any Python object to text in a way that aids debugging / useful logging.☆19Mar 22, 2022Updated 4 years ago
- A web-based, interactive pangenome visualization tool☆21Apr 10, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ONEcode package to replace SAM/BAM, especially for eDNA mapping to everything☆20Aug 17, 2026Updated last month
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆17Sep 24, 2020Updated 5 years ago
- Pipeline for phasing sequence data in polyploids. Designed for target enrichment data, but probably works with other data too.☆12Jun 20, 2024Updated 2 years ago
- Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…☆51Jun 7, 2023Updated 3 years ago
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆22Aug 7, 2023Updated 3 years ago
- Repository☆10Oct 23, 2024Updated last year
- Lint Nextflow pipelines in Python.☆11Jan 23, 2025Updated last year
- comparative genome dot plot viewer☆10May 19, 2019Updated 7 years ago
- python stuff I use☆20Feb 16, 2026Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simple succinct data structures (in Rust)☆55Sep 14, 2026Updated last week
- Generate beautiful API documentation for Nextflow pipelines☆19Aug 9, 2026Updated last month
- Emacs git history interface☆20Jul 19, 2022Updated 4 years ago
- Perl implementation Avro Data Serializer. See new official repo☆15Apr 30, 2015Updated 11 years ago
- Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.☆11Jan 6, 2026Updated 8 months ago
- A bioinformatics pipeline to phase and impute genetic data☆35Updated this week
- Bioinformatics Open Source Sequence machine☆32Jun 18, 2026Updated 3 months ago