Victorian-Bioinformatics-Consortium / nesoni
High throughput sequencing analysis tools
☆30Updated 2 years ago
Alternatives and similar repositories for nesoni:
Users that are interested in nesoni are comparing it to the libraries listed below
- Assembly by Reduced Complexity (ARC)☆41Updated 8 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 2 years ago
- Calculates the lowest common ancestors of each query sequence in a Blast result☆31Updated 7 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- Rank-based Gene Ontology analysis of gene expression data☆40Updated 2 years ago
- Merge transcriptome assemblies☆30Updated 8 years ago
- Using kallisto for metagenomic analysis☆50Updated 8 years ago
- Visualize whole genome alignments as linear maps☆70Updated 3 months ago
- Evolutionary Transcriptomics with R☆41Updated this week
- Generates an NCBI .tbl file of annotations on a genome.☆65Updated 6 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- web documentation for Trinotate☆48Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Dot: An interactive dot plot viewer for comparative genomics☆6Updated 5 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 4 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Adapters for trimming☆30Updated 5 years ago
- ☆23Updated 6 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- catalog for long-read sequencing tools☆32Updated last year
- Toolkit for preparing genomes for submission to NCBI☆29Updated 3 years ago
- Remove lambda phage reads from a fastq file☆28Updated 2 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆35Updated 2 months ago
- GATB Minia assembly pipeline☆30Updated last year