Shareable project for: Decomposing Oncogenic Transcriptional Signatures to Generate Maps of Divergent Cellular States
☆10Nov 11, 2020Updated 5 years ago
Alternatives and similar repositories for onco_gps_paper_analysis
Users that are interested in onco_gps_paper_analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Jul 17, 2026Updated last week
- 🧬☆15Jan 4, 2026Updated 6 months ago
- cyclone☆19Jul 21, 2015Updated 11 years ago
- Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)☆20Apr 27, 2015Updated 11 years ago
- model-based understanding of single-cell CRISPR screening☆29Dec 13, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- GREAT algorithm in Python☆16Oct 24, 2022Updated 3 years ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 3 years ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- Ideas, code and results of the 2018 CytoData hackathon☆13Jan 23, 2024Updated 2 years ago
- A unified downloader+preprocessor for cancer genomics datasets☆16Apr 7, 2024Updated 2 years ago
- Single cell Morphology Quality Control (coSMicQC)☆11Jul 17, 2026Updated last week
- Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs☆11Dec 21, 2019Updated 6 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆67May 26, 2026Updated last month
- Material for the Berlin Bayesian reading group covering Statistical Rethinking by Richard McElreath☆10May 7, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆10Aug 5, 2021Updated 4 years ago
- Image-based Profiling Handbook☆11Apr 15, 2025Updated last year
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Nov 3, 2021Updated 4 years ago
- Probabilistic inference using contraction of tensor networks☆25Sep 9, 2025Updated 10 months ago
- Design files and outline of assembly technique for an Infinity Mirror Octahedron☆32Mar 30, 2021Updated 5 years ago
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆25Dec 3, 2025Updated 7 months ago
- Code for CHAMMI-75 - ICLR 2026☆18Jun 29, 2026Updated 3 weeks ago
- Predicting Cell Health with Morphological Profiles☆41Jan 26, 2022Updated 4 years ago
- Julia implementation of the next generation GSEA 🏔️☆38May 11, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆12Apr 21, 2023Updated 3 years ago
- miscellaneous script-like stuff in go for bioinformatics☆14Nov 4, 2016Updated 9 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆47Jan 27, 2020Updated 6 years ago
- Code used for biomarker discovery using party (building conditional random forests)☆15May 18, 2018Updated 8 years ago
- ☆35Sep 6, 2017Updated 8 years ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆35Jun 8, 2026Updated last month
- ☆10Jan 19, 2019Updated 7 years ago
- COMUNET: a tool to explore and visualize intercellular communication☆13Apr 15, 2020Updated 6 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The code for Daugherty, et al 2017 - Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans☆11Aug 24, 2017Updated 8 years ago
- EasyMKL☆14Jun 12, 2018Updated 8 years ago
- Jupyter Notebooks for the Image Data Resource☆19Jun 25, 2026Updated 3 weeks ago
- ☆17Oct 20, 2023Updated 2 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Jun 17, 2026Updated last month
- 🎓 Uni-Bonn Decision Analysis graduate course, lectures and materials☆26Jun 24, 2026Updated last month
- Agent simulation of aerial search and rescue in the Unity Framework☆11Jun 3, 2014Updated 12 years ago