federicomarini / pcaExplorerLinks
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
☆56Updated 3 months ago
Alternatives and similar repositories for pcaExplorer
Users that are interested in pcaExplorer are comparing it to the libraries listed below
Sorting:
- Bioconductor package for management of multi-assay data☆73Updated 2 weeks ago
- Explore design matrices interactively with R/Shiny☆37Updated 3 months ago
- Automate package and project setup for Bioconductor packages☆53Updated 4 months ago
- Genome Interval Arithmetic in R☆93Updated this week
- fastqcr: Quality Control of Sequencing Data☆74Updated 2 years ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…☆91Updated 4 years ago
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 5 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆78Updated 3 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆89Updated 4 years ago
- Grid and ggplot2 based visualization for biological data☆114Updated this week
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Updated 4 years ago
- Glimma R package☆50Updated 11 months ago
- Representation and manipulation of genomic intervals☆45Updated last month
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 8 months ago
- ☆20Updated 3 weeks ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 8 months ago
- Visualize Cytometry data with ggplot2☆59Updated last month
- Brings SummarizedExperiment to the tidyverse☆26Updated 3 weeks ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- Template for building a bioconductor workshop package using github actions☆20Updated last month
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 3 months ago
- An R package for multivariate adaptive shrinkage.☆92Updated 9 months ago
- A grammar of genomic data transformation☆148Updated last month
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated 2 years ago