federicomarini / pcaExplorerLinks
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
☆56Updated 5 months ago
Alternatives and similar repositories for pcaExplorer
Users that are interested in pcaExplorer are comparing it to the libraries listed below
Sorting:
- Explore design matrices interactively with R/Shiny☆37Updated 3 weeks ago
- Genome Interval Arithmetic in R☆94Updated last week
- Automate package and project setup for Bioconductor packages☆54Updated 7 months ago
- fastqcr: Quality Control of Sequencing Data☆74Updated 2 years ago
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆88Updated 4 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated 2 weeks ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated last month
- Glimma R package☆50Updated last year
- Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…☆91Updated 4 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆43Updated this week
- Brings SummarizedExperiment to the tidyverse☆26Updated this week
- Representation and manipulation of genomic intervals☆46Updated this week
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 11 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆83Updated 3 months ago
- Demonstration of the use of an R package to organize a data analysis project☆21Updated 5 years ago
- Grid and ggplot2 based visualization for biological data☆116Updated 3 weeks ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 3 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- ☆20Updated 3 months ago
- A grammar of genomic data transformation☆148Updated 4 months ago
- An R package for multivariate adaptive shrinkage.☆92Updated 11 months ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Updated 4 years ago
- An introduction to matrix factorization and PCA and SVD.☆41Updated 2 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 10 months ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆45Updated 10 months ago
- A container (S4 class) for matrix-like assays☆36Updated last month
- Project Website:☆54Updated 4 months ago
- Visualize Cytometry data with ggplot2☆62Updated last month