federicomarini / pcaExplorerLinks
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
☆56Updated last week
Alternatives and similar repositories for pcaExplorer
Users that are interested in pcaExplorer are comparing it to the libraries listed below
Sorting:
- Bioconductor package for management of multi-assay data☆74Updated last month
- Explore design matrices interactively with R/Shiny☆38Updated last month
- fastqcr: Quality Control of Sequencing Data☆75Updated 2 years ago
- Genome Interval Arithmetic in R☆94Updated last week
- Automate package and project setup for Bioconductor packages☆54Updated 9 months ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 5 years ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated 3 weeks ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆88Updated 5 years ago
- An R package for multivariate adaptive shrinkage.☆91Updated last year
- Web application for enormous biological heatmaps☆66Updated 5 years ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated 2 years ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 3 months ago
- Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…☆91Updated 4 years ago
- Glimma R package☆50Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- Brings SummarizedExperiment to the tidyverse☆29Updated last month
- An introduction to matrix factorization and PCA and SVD.☆41Updated 2 years ago
- A container (S4 class) for matrix-like assays☆36Updated last month
- Visualize Cytometry data with ggplot2☆63Updated 3 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated this week
- Representation and manipulation of genomic intervals☆46Updated 2 weeks ago
- ☆20Updated last month
- Easy to define segments in y-axis for 'ggplot2'.☆27Updated 6 years ago
- Demonstration of the use of an R package to organize a data analysis project☆22Updated 5 years ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 3 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆45Updated last year
- A grammar of genomic data transformation☆150Updated last month
- Grid and ggplot2 based visualization for biological data☆115Updated 2 months ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated last year
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Updated 4 years ago