Alternatives and similar repositories for IPDMHC

Users that are interested in IPDMHC are comparing it to the libraries listed below

• mwang87 / GNPS_MASST
  ☆14Updated last week
• mohimanilab / MetaMiner
  a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs
  ☆12Updated 4 years ago
• computational-metabolomics / structToolbox
  R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox: An extensive set of data (pre-)processing and analysis m…
  ☆11Updated 8 months ago
• adigorla / xgap
  xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …
  ☆11Updated 5 years ago
• erhard-lab / grandR
  R package for nucleotide conversion sequencing data analysis
  ☆16Updated last week
• cwieder / PathIntegrate
  PathIntegrate Python package for pathway-based multi-omics data integration
  ☆18Updated last year
• saezlab / ShinyFUNKI
  FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…
  ☆14Updated 4 years ago
• jfnavarro / hla_pipeline
  DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions
  ☆11Updated 4 years ago
• KHP-Informatics / NGS_Workshop_Advanced_Bioinformatics
  ☆13Updated 10 months ago
• tdseher / simple-codon-optimizer
  Simple Python program to perform codon optimization or heterology calculations.
  ☆11Updated 4 years ago
• GCA-VH-lab / uorf4u
  uorf4u is a bioinformatics tool for conserved upstream ORF annotation.
  ☆13Updated 4 months ago
• cwieder / py-ssPA
  Single sample pathway analysis tools for omics data
  ☆13Updated last year
• biorack / magi
  Quickly find and score consensus between metabolite identifications and gene annotations
  ☆18Updated 2 months ago
• alberlab / igm
  Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures
  ☆12Updated 2 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated 11 months ago
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆20Updated 3 years ago
• ML4GLand / SeqPro
  Genomic sequence preprocessing toolkit
  ☆13Updated last week
• marcottelab / protein_complex_maps
  Kdrew's scripts for handling protein complex map data
  ☆14Updated 7 months ago
• arshajii / lava
  LAVA: Lightweight Assignment of Variant Alleles
  ☆17Updated 8 years ago
• ICGC-TCGA-PanCancer / Seqware-BWA-Workflow
  This is the BWA workflow used in the PanCancer project used to allign all the BAM files.
  ☆11Updated 3 years ago
• XPRESSyourself / XPRESSpipe
  An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data
  ☆13Updated last year
• julianeweller / MinsePIE
  Modelling insertion efficiency for Prime Insertion Experiments
  ☆13Updated last year
• KHP-Informatics / DNAscanv2
  DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…
  ☆14Updated last year
• pwwang / biopipen
  A set of processes/pipelines for bioinformatics
  ☆14Updated last week
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• denisbeslic / BacterialGenomeAnalysis
  Automated pipeline for whole bacterial genome analysis based on snakemake
  ☆12Updated 3 years ago
• Xinglab / IRIS
  IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
  ☆28Updated last year
• Immunotools / IgDetective
  a tool for annotation of immunoglobulin genes in genome assemblies
  ☆14Updated 3 months ago
• ding-lab / VirusScan
  VirusScan Pipeline
  ☆11Updated 2 weeks ago
• HLee-Six / colon_microbiopsies
  Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"
  ☆11Updated 4 years ago