PharMolix / LangCellLinks
Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
☆63Updated 10 months ago
Alternatives and similar repositories for LangCell
Users that are interested in LangCell are comparing it to the libraries listed below
Sorting:
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆99Updated last year
- ☆84Updated 3 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆122Updated 7 months ago
- ☆369Updated 9 months ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆66Updated 11 months ago
- ☆353Updated this week
- Awesome-AI-Virtual-Cell☆127Updated this week
- ☆334Updated last year
- ☆24Updated last year
- GeneCompass☆98Updated last month
- Single-Cell (Perturbation) Model Library☆81Updated 2 months ago
- A model developed for the generation of scRNA-seq data☆78Updated 8 months ago
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆309Updated 9 months ago
- ☆335Updated 5 months ago
- UCE is a zero-shot foundation model for single-cell gene expression data☆224Updated 8 months ago
- ☆30Updated last year
- Transformer for One-Stop Interpretable Cell-type Annotation☆144Updated last year
- Code for evaluating single cell foundation models scBERT and scGPT☆46Updated last year
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆59Updated last year
- ☆29Updated last month
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆78Updated last month
- ☆45Updated 2 years ago
- ☆132Updated 7 months ago
- ☆73Updated last year
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆450Updated this week
- ☆54Updated 11 months ago
- ☆295Updated last year
- Comprehensive suite for evaluating perturbation prediction models☆106Updated last week
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆53Updated 4 months ago
- ☆63Updated last week