PharMolix / LangCellLinks
Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
☆65Updated last year
Alternatives and similar repositories for LangCell
Users that are interested in LangCell are comparing it to the libraries listed below
Sorting:
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆101Updated last year
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆144Updated last month
- ☆90Updated 5 months ago
- Awesome-AI-Virtual-Cell☆157Updated last week
- ☆343Updated 2 years ago
- ☆384Updated last month
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆73Updated last year
- ☆383Updated this week
- GeneCompass☆106Updated last month
- Single-Cell (Perturbation) Model Library☆88Updated last week
- UCE is a zero-shot foundation model for single-cell gene expression data☆236Updated 10 months ago
- ☆337Updated 7 months ago
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆325Updated 11 months ago
- ☆33Updated last year
- A model developed for the generation of scRNA-seq data☆82Updated 10 months ago
- ☆25Updated last year
- ☆134Updated 9 months ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆61Updated last year
- ☆38Updated 3 months ago
- ☆302Updated last year
- Code for evaluating single cell foundation models scBERT and scGPT☆46Updated last year
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆84Updated 3 months ago
- Single-cell perturbation effects prediction benchmark☆50Updated last week
- Transformer for One-Stop Interpretable Cell-type Annotation☆146Updated last year
- ☆77Updated last week
- ☆56Updated last year
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆495Updated 2 weeks ago
- ☆24Updated 7 months ago
- Code for "SToFM: a Multi-scale Foundation Model for Spatial Transcriptomics".☆42Updated 4 months ago
- ☆104Updated 2 months ago