PharMolix / LangCellLinks
Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
☆63Updated 11 months ago
Alternatives and similar repositories for LangCell
Users that are interested in LangCell are comparing it to the libraries listed below
Sorting:
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆99Updated last year
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆131Updated 2 weeks ago
- ☆85Updated 3 months ago
- ☆373Updated 2 weeks ago
- ☆370Updated this week
- GeneCompass☆101Updated this week
- ☆339Updated last year
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆69Updated 11 months ago
- ☆32Updated last year
- UCE is a zero-shot foundation model for single-cell gene expression data☆231Updated 9 months ago
- Single-Cell (Perturbation) Model Library☆84Updated 3 months ago
- ☆24Updated last year
- Awesome-AI-Virtual-Cell☆133Updated last week
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆315Updated 10 months ago
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆80Updated last month
- A model developed for the generation of scRNA-seq data☆79Updated 9 months ago
- ☆336Updated 6 months ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆60Updated last year
- Code for evaluating single cell foundation models scBERT and scGPT☆46Updated last year
- ☆76Updated last year
- ☆133Updated 8 months ago
- ☆45Updated 2 years ago
- ☆297Updated last year
- Transformer for One-Stop Interpretable Cell-type Annotation☆146Updated last year
- ☆35Updated 2 months ago
- ☆10Updated last year
- Comprehensive suite for evaluating perturbation prediction models☆112Updated 3 weeks ago
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆464Updated 3 weeks ago
- ☆55Updated last year
- ☆122Updated 3 weeks ago