PharMolix / LangCellLinks
Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
☆64Updated last year
Alternatives and similar repositories for LangCell
Users that are interested in LangCell are comparing it to the libraries listed below
Sorting:
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆100Updated last year
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆139Updated last month
- ☆88Updated 4 months ago
- GeneCompass☆103Updated 3 weeks ago
- Single-Cell (Perturbation) Model Library☆86Updated 2 weeks ago
- ☆25Updated last year
- ☆380Updated last month
- ☆377Updated 2 weeks ago
- Awesome-AI-Virtual-Cell☆144Updated 2 weeks ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆71Updated last year
- ☆341Updated 2 years ago
- ☆32Updated last year
- UCE is a zero-shot foundation model for single-cell gene expression data☆234Updated 10 months ago
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆322Updated 10 months ago
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆81Updated 2 months ago
- ☆335Updated 7 months ago
- A model developed for the generation of scRNA-seq data☆81Updated 10 months ago
- ☆134Updated 8 months ago
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆61Updated last year
- Transformer for One-Stop Interpretable Cell-type Annotation☆146Updated last year
- Code for "SToFM: a Multi-scale Foundation Model for Spatial Transcriptomics".☆38Updated 3 months ago
- ☆56Updated last year
- ☆298Updated last year
- ☆35Updated 3 months ago
- Code for evaluating single cell foundation models scBERT and scGPT☆46Updated last year
- ☆76Updated last year
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆479Updated this week
- ☆23Updated 6 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆34Updated 2 years ago
- ☆45Updated 2 years ago