☆25Jun 5, 2025Updated 10 months ago
Alternatives and similar repositories for GenBench
Users that are interested in GenBench are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Mar 25, 2026Updated 2 weeks ago
- A Large-Scale Dataset and Framework for Genetic Variant Representation Learning☆33Apr 4, 2026Updated last week
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆40Mar 27, 2025Updated last year
- Size-Wise Analysis of Transfer Learning of pLM Embeddings☆12Jun 10, 2025Updated 10 months ago
- ☆49Mar 22, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆19Dec 20, 2025Updated 3 months ago
- [NeurIPS 2024] Image Understanding Makes for A Good Tokenizer for Image Generation☆22Dec 17, 2024Updated last year
- ☆46Sep 13, 2023Updated 2 years ago
- ☆25Jan 9, 2026Updated 3 months ago
- JanusDNA☆27Mar 19, 2026Updated 3 weeks ago
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated 2 years ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆62Aug 2, 2024Updated last year
- A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.☆300May 28, 2025Updated 10 months ago
- ☆12Nov 9, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆469Jan 1, 2026Updated 3 months ago
- Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.☆96Nov 13, 2025Updated 5 months ago
- Benchmarks for classification of genomic sequences☆174Aug 14, 2025Updated 8 months ago
- RNA-seq prediction with deep convolutional neural networks.☆235Aug 28, 2025Updated 7 months ago
- Transform data from RCSB Protein Data Bank for secondary structure prediction☆12Feb 20, 2019Updated 7 years ago
- ☆13Jan 23, 2025Updated last year
- GENA-LM is a transformer masked language model trained on human DNA sequence.☆222Updated this week
- ☆18May 15, 2023Updated 2 years ago
- Bionic Reading is a new method facilitating the reading process by guiding the eyes through text with artificial fixation points. As a re…☆15May 20, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Jul 10, 2025Updated 9 months ago
- A tool for visualising kmers in 2D space.☆12Feb 23, 2025Updated last year
- Foundation Models for Genomics & Transcriptomics☆848Feb 24, 2026Updated last month
- Inferring disease-associated miRNAs☆10Mar 21, 2020Updated 6 years ago
- Genomic Pre-trained Network☆337Mar 25, 2026Updated 3 weeks ago
- Official implementation for the paper "Toward Scientific Reasoning in LLMs: Training from Expert Discussions via Reinforcement Learning"☆56Jun 4, 2025Updated 10 months ago
- ☆13Feb 12, 2024Updated 2 years ago
- ☆40Sep 17, 2024Updated last year
- a super basic tutorial on how to create a pytorch models for raw DNA sequences☆26Sep 12, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Linear Attention for Efficient Bidirectional Sequence Modeling☆16May 13, 2025Updated 11 months ago
- Computational Optimization of DNA Activity (CODA)☆67Apr 3, 2025Updated last year
- A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.☆14May 3, 2023Updated 2 years ago
- All the baselines and experiments settings on the SpartQA☆12Apr 26, 2023Updated 2 years ago
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆129Oct 31, 2024Updated last year
- This is an Uncertainty Study Arxiv☆12Mar 4, 2025Updated last year
- This repository hosts a minimal version of a Python API for BPNet.☆56Jan 24, 2026Updated 2 months ago