xCompass-AI / GeneCompassLinks
GeneCompass
☆84Updated last month
Alternatives and similar repositories for GeneCompass
Users that are interested in GeneCompass are comparing it to the libraries listed below
Sorting:
- Transformer for One-Stop Interpretable Cell-type Annotation☆143Updated last year
- Code for evaluating single cell foundation models scBERT and scGPT☆45Updated 11 months ago
- Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.☆71Updated last month
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆61Updated last year
- ☆74Updated 2 months ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆83Updated 3 years ago
- ☆65Updated 2 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆129Updated 5 months ago
- ☆132Updated last year
- Computational Optimization of DNA Activity (CODA)☆60Updated 4 months ago
- A simulator for single cell multi-omics and spatial omics data that provides ground truth to benchmark a wide range of methods.☆57Updated 6 months ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆54Updated last year
- Single-Cell (Perturbation) Model Library☆64Updated last week
- ☆60Updated this week
- ☆110Updated 2 months ago
- single cell foundation model for Gene network inference and more☆96Updated this week
- ☆52Updated 8 months ago
- A modular framework for multimodal cross-cell-type transcriptional regulation models☆84Updated last week
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆55Updated 7 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆95Updated 4 months ago
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆120Updated 2 months ago
- ☆20Updated 9 months ago
- ☆10Updated 2 months ago
- ☆124Updated 4 months ago
- ☆23Updated 3 months ago
- CellPolaris☆10Updated 11 months ago
- ☆43Updated last year
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆103Updated 2 years ago
- ☆207Updated last year
- ☆19Updated 3 months ago