lemaslab / rumpLinks
A Reproducible Untargeted Metabolomics Data Processing Pipeline
☆11Updated 4 years ago
Alternatives and similar repositories for rump
Users that are interested in rump are comparing it to the libraries listed below
Sorting:
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs☆12Updated 3 years ago
- R interface to Chemical Translation Service (CTS)☆14Updated 10 months ago
- R codes for creating metamapp graphs and files☆8Updated 2 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Notebooks in computational metabolomics☆15Updated 4 months ago
- Distinguishing between generic and experiment-specific gene expression signals.☆12Updated 2 years ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆34Updated 8 months ago
- Single sample pathway analysis tools for omics data☆12Updated 6 months ago
- ☆12Updated last month
- Github for files currently published in the IPD-MHC FTP Directory hosted at the European Bioinformatics Institute☆14Updated 3 months ago
- Bioinformatics course (WSBIM1322)☆17Updated 5 months ago
- Client-side REST access to KEGG☆11Updated last month
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆13Updated 3 years ago
- Freelance bioinformaticians directory☆9Updated 2 years ago
- ☆21Updated 8 years ago
- ☆10Updated 5 years ago
- Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.☆17Updated this week
- The command-line interface to GGD☆43Updated 2 years ago
- an open source data platform, developed in the Korcsmaros Group to store, analyze and integrate bioinformatics data☆11Updated 4 years ago
- stageR package☆13Updated 2 years ago
- Template for building a bioconductor workshop package using github actions☆20Updated 10 months ago
- phylogenetic analyses informed by deep mutational scanning data☆14Updated 11 months ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆20Updated 4 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆16Updated 6 months ago
- UChicago BSD Quantitative Bootcamp 2020☆11Updated 3 years ago
- PanGenomePipeline☆16Updated last year
- Deprecated, see https://labsyspharm.github.io/rnaseq/☆12Updated 6 years ago
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 4 years ago
- State-of-the-art ab initio prediction of 1D protein structure annotations☆14Updated 4 years ago