Alternatives and similar repositories for autoqtl

Users that are interested in autoqtl are comparing it to the libraries listed below

• AtteAalto / BINGO
  ☆12Updated 3 years ago
• SydneyBioX / SimBench
  ☆17Updated last year
• cran / SNFtool
   This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion
  ☆22Updated 4 years ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆23Updated last year
• CamaraLab / TDA-TCGA
  R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
  ☆11Updated 4 years ago
• yangzi4 / iNMF
  Source code for integrative nonnegative matrix factorization
  ☆19Updated 7 years ago
• srp33 / ShinyLearner
  ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms
  ☆18Updated 3 years ago
• science-machine / biomlbench
  Benchmark agents on BioML tasks
  ☆56Updated 2 months ago
• klarman-cell-observatory / Perturb-CITE-seq
  ☆15Updated 3 years ago
• RabadanLab / randomly
  A Library for Denoising Single-Cell Data with Random Matrix Theory
  ☆37Updated 2 years ago
• BIMSBbioinfo / compgen2021
  ☆77Updated 4 years ago
• lingfeiwang / findr
  Fast Inference of Networks from Directed Regulations
  ☆22Updated last year
• greenelab / BioBombe
  BioBombe: Sequentially compressed gene expression features enhances biological signatures
  ☆65Updated last year
• HenrikBengtsson / aroma.affymetrix
  🔬 R package: Analysis of Large Affymetrix Microarray Data Sets
  ☆12Updated 3 months ago
• BIRSBiointegration / Hackathon
  Multi-omics studies are available here
  ☆52Updated 3 years ago
• flo-compbio / monet
  Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces
  ☆40Updated 4 years ago
• HelenaLC / simulation-comparison
  Snakemake workflow to benchmark scRNA-seq data simulators
  ☆14Updated 3 years ago
• tjiagoM / gtex-transcriptome-modelling
  Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits
  ☆11Updated 4 years ago
• bowang-lab / scFormer
  ☆19Updated 2 years ago
• omiq-ai / Multicore-opt-SNE
  Parallel opt-SNE implementation with Python wrapper
  ☆38Updated 3 years ago
• waldronlab / data-science-seminar
  Topics In Data Science and Bioinformatics
  ☆79Updated last year
• drisso / zinbwave
  Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave
  ☆45Updated last year
• daniel-spies / rna-seq_tcComp
  Comparison of RNA-seq time course differential expression analysis tools
  ☆13Updated 7 years ago
• AlexsLemonade / OpenPBTA-manuscript
  The manuscript repository for the Open Pediatric Brain Tumor Atlas Project
  ☆14Updated 2 years ago
• GenoML / genoml2
  GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data
  ☆33Updated 5 months ago
• Teichlab / covid19_MS1
  Analysis notebooks for "SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes".
  ☆14Updated 5 years ago
• KrishnaswamyLab / Multiscale_PHATE
  Creating multi-resolution embeddings and clusters from high dimensional data
  ☆56Updated last year
• NikolayOskolkov / DeepLearningSingleCellBiology
  Here I show how to use Deep Autoencoders for single cell RNA sequencing data analysis
  ☆19Updated 6 years ago
• SaccoPerfettoLab / SignalingProfiler
  SignalingProfiler is a pipeline that builds signaling networks to cellular phenotypes from multiomics data.
  ☆15Updated last month
• bowang-lab / BIONIC
  Biological Network Integration using Convolutions
  ☆62Updated last year