Alternatives and similar repositories for autoqtl

Users that are interested in autoqtl are comparing it to the libraries listed below

• cran / SNFtool
   This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion
  ☆23Updated 4 years ago
• BIMSBbioinfo / compgen2021
  ☆77Updated 4 years ago
• science-machine / biomlbench
  Benchmark agents on BioML tasks
  ☆60Updated 3 months ago
• srp33 / ShinyLearner
  ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms
  ☆18Updated 4 years ago
• maxconway / SNFtool
  Similarity Network Fusion
  ☆37Updated 10 years ago
• CamaraLab / TDA-TCGA
  R package for the identification of cancer-associated mutated genes using gene expression and mutation data.
  ☆11Updated 4 years ago
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆16Updated 2 years ago
• GenoML / genoml2
  GenoML (genoml2) is an open source Python package. It is an automated machine learning (autoML) platform for genomics data
  ☆33Updated 5 months ago
• SydneyBioX / SimBench
  ☆17Updated last year
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆24Updated last year
• opentargets / stopReasons
  Analysis on stop reasons
  ☆10Updated last year
• tjiagoM / gtex-transcriptome-modelling
  Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits
  ☆11Updated 4 years ago
• omiq-ai / Multicore-opt-SNE
  Parallel opt-SNE implementation with Python wrapper
  ☆38Updated 3 years ago
• NikolayOskolkov / DeepLearningSingleCellBiology
  Here I show how to use Deep Autoencoders for single cell RNA sequencing data analysis
  ☆19Updated 6 years ago
• netZoo / netbooks
  Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..
  ☆45Updated last month
• lujonathanh / BETS
  Bootstrap Elastic net regression from Time Series is a vector-autoregressive approach to causal inference from gene expression time serie…
  ☆20Updated 2 years ago
• AtteAalto / BINGO
  ☆12Updated 3 years ago
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆50Updated 2 years ago
• AlexsLemonade / OpenPBTA-manuscript
  The manuscript repository for the Open Pediatric Brain Tumor Atlas Project
  ☆14Updated 2 years ago
• ayushnoori / metapaths
  Similarity search in heterogeneous knowledge graphs using meta paths.
  ☆29Updated 2 years ago
• GuanLab / Awesome-Bioinformatics
  2018 Recommended Papers to Read in Bioinformatics as Voted by Bioinformaticians
  ☆26Updated 7 years ago
• spiros / tofu
  Tofu is a Python tool for generating synthetic UK Biobank data.
  ☆65Updated 2 years ago
• JonnyTran / OpenOmics
  A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
  ☆36Updated last year
• kstawiski / OmicSelector
  OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning …
  ☆35Updated last month
• valence-labs / Tx-Evaluation
  Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks
  ☆11Updated last year
• PavlopoulosLab / NORMA
  Network annotation visualization
  ☆18Updated 6 months ago
• BIRSBiointegration / Hackathon
  Multi-omics studies are available here
  ☆52Updated 3 years ago
• waldronlab / data-science-seminar
  Topics In Data Science and Bioinformatics
  ☆79Updated last year
• snap-stanford / planet
  PlaNet: Predicting population response to drugs via clinical knowledge graph
  ☆31Updated 9 months ago
• KrishnaswamyLab / Multiscale_PHATE
  Creating multi-resolution embeddings and clusters from high dimensional data
  ☆56Updated last year