Alternatives and similar repositories for ilus

Users that are interested in ilus are comparing it to the libraries listed below

• WGLab / dragonstar2019
  ☆136Updated 6 years ago
• rajewsky-lab / mirdeep2
  Discovering known and novel miRNAs from small RNA sequencing data
  ☆158Updated 3 weeks ago
• nloyfer / wgbs_tools
  tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
  ☆178Updated 3 weeks ago
• Xinglab / rmats2sashimiplot
  ☆157Updated 7 months ago
• ENCODE-DCC / rna-seq-pipeline
  ☆157Updated 3 years ago
• shiquan / bamdst
  a lightweight bam file depth statistical tool
  ☆160Updated last year
• PacificBiosciences / IsoSeq
  Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
  ☆227Updated 6 months ago
• BGI-shenzhen / LDBlockShow
  LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
  ☆198Updated 6 months ago
• virajbdeshpande / AmpliconArchitect
  AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and …
  ☆156Updated last year
• bli25 / RSEM_tutorial
  A short tutorial on how to use RSEM
  ☆139Updated 5 years ago
• xuzhougeng / org.Osativa.eg.db
  ☆21Updated 6 years ago
• BioOmics / iSeq
  Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
  ☆230Updated last month
• xryanglab / RiboCode
  release version
  ☆57Updated 3 years ago
• signalbash / how_are_we_stranded_here
  Check strandedness of RNA-Seq fastq files
  ☆128Updated 3 years ago
• MonashBioinformaticsPlatform / RSeQC
  fork of RSeQC python RNAseq metrics suit of tools
  ☆49Updated 6 years ago
• dkoboldt / varscan
  Variant calling and somatic mutation/CNV detection for next-generation sequencing data
  ☆165Updated 2 years ago
• OpenGene / GeneFuse
  Gene fusion detection and visualization
  ☆131Updated 3 years ago
• ConesaLab / SQANTI3
  Tool for the Quality Control of Long-Read Defined Transcriptomes
  ☆251Updated last week
• BoevaLab / FREEC
  Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data
  ☆175Updated last year
• Xinglab / rmats-turbo
  ☆286Updated 2 months ago
• xuzhougeng / R-ChIP-data-analysis
  ☆51Updated 7 years ago
• ENCODE-DCC / hic-pipeline
  HiC uniform processing pipeline
  ☆62Updated 2 years ago
• ding-lab / msisensor
  microsatellite instability detection using tumor only or paired tumor-normal data
  ☆132Updated 5 years ago
• yupenghe / methylpy
  WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
  ☆146Updated 2 years ago
• suhrig / arriba
  Fast and accurate gene fusion detection from RNA-Seq data
  ☆257Updated 3 months ago
• BGI-flexlab / SOAPnuke
  A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files
  ☆113Updated last year
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆105Updated 4 years ago
• mhammell-laboratory / TEtranscripts
  A package for including transposable elements in differential enrichment analysis of sequencing datasets.
  ☆274Updated 2 months ago
• pzweuj / pzweuj.github.io
  Go to
  ☆35Updated this week
• epi2me-labs / wf-transcriptomes
  ☆109Updated last month